RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 RPS6KA3P51812 740 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SPATA6LQ8N4H0 392 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SEMA3CQ99985 751 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SNX7Q9UNH6 387 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 MAFO75444 373 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 FTH1P02794 183 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 CTSKP43235 329 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 HSF2Q03933 536 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 CNPY1Q3B7I2 92 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 FAM171A1Q5VUB5 890 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 REP15Q6BDI9 236 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ARMCX6Q7L4S7 300 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SLC34A3Q8N130 599 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 PARP8Q8N3A8 854 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SVOPLQ8N434 492 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 C4orf32Q8N8J7 132 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 LINGO1Q96FE5 620 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 RNF208Q9H0X6 261 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SP140LQ9H930 580 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 TMEM165Q9HC07 324 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 CHST10O43529 356 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 HIST1H2ABP04908 130 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 MSX2P35548 267 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 RALGDSQ12967 914 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ZNHIT3Q15649 155 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 AKIRIN2Q53H80 203 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 HIST3H2AQ7L7L0 130 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 STRADAQ7RTN6 431 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 METTL3Q86U44 580 aaKnown RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SATL1Q86VE3 508 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 VSIG10LQ86VR7 867 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ZFPM1Q8IX07 1006 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ARL10Q8N8L6 244 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 HIST1H2ACQ93077 130 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 HHIPL1Q96JK4 782 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 UROC1Q96N76 676 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 AP3D1O14617 1153 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SCN1BQ07699 218 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SGCGQ13326 291 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 XKR6Q5GH73 641 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 KLHL24Q6TFL4 600 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 CBR4Q8N4T8 237 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 RAB2BQ8WUD1 216 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 PIK3R3Q92569 461 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 DGKBQ9Y6T7 804 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 COL2A1P02458 1487 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ANGPTL1O95841 491 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 ATP5C1P36542 298 aaKnown RBP13.77□□□□□ -0.2
SREBF2-202ENST00000424354 PRKAG1P54619 331 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 ADGRE1Q14246 886 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 GPAT3Q53EU6 434 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 WSCD1Q658N2 575 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 MEIOBQ8N635 442 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 ZNF655Q8N720 491 aaPredicted RBP13.77□□□□□ -0.2
SREBF2-202ENST00000424354 TNFRSF25Q93038 417 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 TSPAN18Q96SJ8 248 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 TELO2Q9Y4R8 837 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 TRPV2Q9Y5S1 764 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 AKR1D1P51857 326 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 MRPS5P82675 430 aaKnown RBP13.77□□□□□ -0.2
SREBF2-202ENST00000424354 RNASEH2BQ5TBB1 312 aaKnown RBP13.77□□□□□ -0.2
SREBF2-202ENST00000424354 HDAC10Q969S8 669 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 CDT1Q9H211 546 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 PTCH2Q9Y6C5 1203 aa13.77□□□□□ -0.2
SREBF2-202ENST00000424354 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 NOL4O94818 638 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 HLA-DQA2P01906 255 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 PCSK2P16519 638 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 PSMA1P25786 263 aaKnown RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 CDK18Q07002 472 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 TAF13Q15543 124 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 AMIGO3Q86WK7 504 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 TRAPPC5Q8IUR0 188 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 OR5B17Q8NGF7 314 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 KREMEN1Q96MU8 473 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 KCNU1A8MYU2 1149 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 NDUFB5O43674 189 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 BUD23O43709 281 aaKnown RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 MPZL2O60487 215 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 CCNYL3P0C7X3 344 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 PTGIRP43119 386 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 JAM2P57087 298 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 RAP1GAP2Q684P5 730 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 APOBEC3HQ6NTF7 200 aaKnown RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 PGLYRP2Q96PD5 576 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 NODALQ96S42 347 aa13.77□□□□□ -0.21
SREBF2-202ENST00000424354 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
SREBF2-202ENST00000424354 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms