RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PDGFAP04085 211 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 GOLGA6DP0CG33 693 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 SOX5P35711 763 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 PPM1FP49593 454 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 JAM2P57087 298 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 SLC10A7Q0GE19 358 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 PPP1R15BQ5SWA1 713 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 GALNT13Q8IUC8 556 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 ZNF599Q96NL3 588 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 NUDCD1Q96RS6 583 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 ULBP3Q9BZM4 244 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 ABCG8Q9H221 673 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 VPS16Q9H269 839 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 GOLGA6AQ9NYA3 693 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 KCND3Q9UK17 655 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 CROTQ9UKG9 612 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 PCDHGA6Q9Y5G7 932 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 TEP1Q99973 2627 aaKnown RBP16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 ANKRD62A6NC57 917 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 RNF224P0DH78 156 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 ZNF28P17035 718 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 ERCC2P18074 760 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 HSPA9P38646 679 aaKnown RBP16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 NFATC2Q13469 925 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 CLEC16AQ2KHT3 1053 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 TMCO4Q5TGY1 634 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 MON1BQ7L1V2 547 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 SLC9B2Q86UD5 537 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 TSPAN33Q86UF1 283 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 PLXDC1Q8IUK5 500 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 PDCD6IPQ8WUM4 868 aaKnown RBP16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 AP2M1Q96CW1 435 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 COX14Q96I36 57 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 MCEEQ96PE7 176 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 STN1Q9H668 368 aaKnown RBP16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 MAP4K5Q9Y4K4 846 aa16.6■□□□□ 0.25
CHCHD3-202ENST00000423635 MN1Q10571 1320 aaPredicted RBP16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 A6NCN8 305 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 GOLGA6L3A6NEY3 463 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 DFFAO00273 331 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 INPP4BO15327 924 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 DNAJC6O75061 913 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 CREG1O75629 220 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 DDAH2O95865 285 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 PEX11BO96011 259 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 C9P02748 559 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 PYGLP06737 847 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 TRAF2Q12933 501 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 SEMA5AQ13591 1074 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 IL11RAQ14626 422 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 CA9Q16790 459 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 RFLNAQ6ZTI6 216 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 RFX8Q6ZV50 586 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 MARK2Q7KZI7 788 aaKnown RBP16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 LYSMD3Q7Z3D4 306 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 TMEM135Q86UB9 458 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 NPWQ8N729 165 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 NOD2Q9HC29 1040 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 GPATCH2LQ9NWQ4 482 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 TBC1D29Q9UFV1 150 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 KLHL3Q9UH77 587 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 AP4E1Q9UPM8 1137 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 ESPL1Q14674 2120 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 CELSR2Q9HCU4 2923 aa16.59■□□□□ 0.25
CHCHD3-202ENST00000423635 CENPEQ02224 2701 aa16.58■□□□□ 0.25
CHCHD3-202ENST00000423635 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 TOX3O15405 576 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 DAPK3O43293 454 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 PGLSO95336 258 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 TNFAIP3P21580 790 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 OGDHQ02218 1023 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 PTSQ03393 145 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 FOXM1Q08050 763 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 PTPRRQ15256 657 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 CAMK4Q16566 473 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 HSP90AA4PQ58FG1 418 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 RALGPS1Q5JS13 557 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 ERMARDQ5T6L9 678 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNF765Q7L2R6 523 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 TRIM74Q86UV6 250 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 PGBD5Q8N414 524 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 GALNT6Q8NCL4 622 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 FNIP1Q8TF40 1166 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 PIH1D2Q8WWB5 315 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 SCAMP4Q969E2 229 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 C9orf72Q96LT7 481 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 HERPUD2Q9BSE4 406 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 DHX35Q9H5Z1 703 aaKnown RBP16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 MLXIPLQ9NP71 852 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNHIT2Q9UHR6 403 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 CD84Q9UIB8 345 aa16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 PCYT1BQ9Y5K3 369 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-202ENST00000423635 KIR2DS5A0A0G2JLQ3 304 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 A0A0G2JNG1 304 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 CDC14CA4D256 554 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 OR5K4A6NMS3 321 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 KIR2DS3K7RE56 304 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms