RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 MARCH9Q86YJ5 346 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 SYCE1Q8N0S2 351 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.6□□□□□ -1.03
MDC1-204ENST00000422266 LSM14AQ8ND56 463 aaKnown RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 COX14Q96I36 57 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 TEKT5Q96M29 485 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 NSMCE3Q96MG7 304 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 SLC46A1Q96NT5 459 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 HERPUD2Q9BSE4 406 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 GPR63Q9BZJ6 419 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 B3GNT4Q9C0J1 378 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 GLOD4Q9HC38 313 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 HACD3Q9P035 362 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 TAAR2Q9P1P5 351 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 IMPACTQ9P2X3 320 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 NFKBIL1Q9UBC1 381 aaPredicted RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 FAM153AQ9UHL3 310 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 SATB2Q9UPW6 733 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 PCDHB1Q9Y5F3 818 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 ASXL3Q9C0F0 2248 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 LRRK1Q38SD2 2015 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 MYLKQ15746 1914 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 APOC4-APOC2K7ER74 178 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 NOBOXO60393 691 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ANXA9O76027 345 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 TJP3O95049 919 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 SLC25A14O95258 325 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 CPNE6O95741 557 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 NDST3O95803 873 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 APOC2P02655 101 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CELA2BP08218 269 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 JMJD7P0C870 316 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 MYF5P13349 255 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 VCLP18206 1134 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CD82P27701 267 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CTNNA1P35221 906 aaKnown RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 ADCY8P40145 1251 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ACTR1BP42025 376 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ZNF75DP51815 510 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CLDN6P56747 220 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 TMPRSS3P57727 454 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ACTR1AP61163 376 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 DYNLT1P63172 113 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CCL7P80098 99 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CTBSQ01459 385 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ZBTB17Q13105 803 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 MPP3Q13368 585 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 TRA2AQ13595 282 aaKnown RBP eCLIP8.59□□□□□ -1.03
MDC1-204ENST00000422266 GSE1Q14687 1217 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 NR1D2Q14995 579 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 PRKD1Q15139 912 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 QPCTQ16769 361 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 MAP9Q49MG5 647 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 PYCR3Q53H96 274 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 C3orf38Q5JPI3 329 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ZNF569Q5MCW4 686 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 KAZNQ674X7 775 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ITPRIPL1Q6GPH6 555 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 SLC30A9Q6PML9 568 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 MFSD7Q6UXD7 560 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 SPOCD1Q6ZMY3 1216 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 RAB11FIP2Q7L804 512 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 SPRED1Q7Z699 444 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 PDZD3Q86UT5 571 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 C17orf82Q86X59 251 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 PHYKPLQ8IUZ5 450 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 FBXO39Q8N4B4 442 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CNTD1Q8N815 330 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CCDC112Q8NEF3 446 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 DTX3LQ8TDB6 740 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 BRSK1Q8TDC3 778 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 KCNE4Q8WWG9 221 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 SCAMP4Q969E2 229 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 TADA1Q96BN2 335 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ATXN7L3BQ96GX2 97 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 PLEKHG4BQ96PX9 1271 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 UBL7Q96S82 380 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 RIOK2Q9BVS4 552 aaKnown RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 SPATA16Q9BXB7 569 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 CARD9Q9H257 536 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 EPB41L1Q9H4G0 881 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 KLHL8Q9P2G9 620 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 ZNHIT2Q9UHR6 403 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 CD84Q9UIB8 345 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 AAR2Q9Y312 384 aaKnown RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 DMXL2Q8TDJ6 3036 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 ANKRD11Q6UB99 2663 aaPredicted RBP8.59□□□□□ -1.03
MDC1-204ENST00000422266 WDFY3Q8IZQ1 3526 aa8.59□□□□□ -1.03
MDC1-204ENST00000422266 RP1P56715 2156 aa8.58□□□□□ -1.04
MDC1-204ENST00000422266 hCG_1818297A0A087WSY0 165 aa8.58□□□□□ -1.04
MDC1-204ENST00000422266 KIR2DS5A0A0G2JLQ3 304 aa8.58□□□□□ -1.04
MDC1-204ENST00000422266 A0A0G2JNG1 304 aa8.58□□□□□ -1.04
MDC1-204ENST00000422266 TEX51A0A1B0GUA7 166 aa8.58□□□□□ -1.04
MDC1-204ENST00000422266 KLHL33A6NCF5 533 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms