RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 AFTPHQ6ULP2 937 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 DCBLD1Q8N8Z6 715 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 STAG3L4Q8TBR4 150 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 TWIST2Q8WVJ9 160 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 STON2Q8WXE9 905 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 LPGAT1Q92604 370 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 ATP6V1E2Q96A05 226 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 CAPNS2Q96L46 248 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 ATOH8Q96SQ7 321 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 CDK5RAP1Q96SZ6 601 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 SLC30A3Q99726 388 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 SLC25A23Q9BV35 468 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 UNC93B1Q9H1C4 597 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 SEMA6AQ9H2E6 1030 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 CREBZFQ9NS37 354 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 COMMD8Q9NX08 183 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 ZDHHC7Q9NXF8 308 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 UTP6Q9NYH9 597 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 PDP2Q9P2J9 529 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 EPS15L1Q9UBC2 864 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 VPS28Q9UK41 221 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 CROTQ9UKG9 612 aa6.29□□□□□ -1.4
ATP2C1-203ENST00000422190 ILVBLA1L0T0 632 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PRORSD1PA6NEY8 169 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 H0Y626 953 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ACOT8O14734 319 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CASQ2O14958 399 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 HOXA2O43364 376 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ECI2O75521 394 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CSPG5O95196 566 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 C1RP00736 705 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 MBL2P11226 248 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 HOXB8P17481 243 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CHRM3P20309 590 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 AGTR2P50052 363 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 SLC7A2P52569 658 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CLCQ05315 142 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 GALNT1Q10472 559 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 LRP8Q14114 963 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TRIM25Q14258 630 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PDK3Q15120 406 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TAF1AQ15573 450 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 MAP7D1Q3KQU3 841 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 UGT3A2Q3SY77 523 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 OGFRL1Q5TC84 451 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 IL23RQ5VWK5 629 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ANKS6Q68DC2 871 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ZFP1Q6P2D0 407 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 FUNDC1Q8IVP5 155 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 FAM126BQ8IXS8 530 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 SIDT2Q8NBJ9 832 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 OR6K2Q8NGY2 324 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 C2orf15Q8WU43 125 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PEX13Q92968 403 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TSC22D3Q99576 134 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TDRD1Q9BXT4 1180 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TFB2MQ9H5Q4 396 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 MED16Q9Y2X0 877 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 GREB1Q4ZG55 1949 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 A0A0J9YYE9 177 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 A0A1B0GVM2 712 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 IQCF5A8MTL0 148 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ANKRD66B4E2M5 251 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TBL1XO60907 577 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 RNASEH2AO75792 299 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TMCC1O94876 653 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PYGLP06737 847 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 HGFP14210 728 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PKMP14618 531 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 HMGA1P17096 107 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CTPS1P17812 591 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CR2P20023 1033 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 MZF1P28698 734 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PRDX3P30048 256 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 POLE2P56282 527 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TRAF2Q12933 501 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 BTG3Q14201 252 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TYSND1Q2T9J0 566 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 C5orf22Q49AR2 442 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 VPS26BQ4G0F5 336 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 SETMARQ53H47 684 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ADGRF1Q5T601 910 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 ATXN7L2Q5T6C5 722 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 FOXB2Q5VYV0 432 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 FBXL19Q6PCT2 694 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.28□□□□□ -1.43e-7■■■□□ 18.5
ATP2C1-203ENST00000422190 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 KIAA1191Q96A73 305 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 CLSTN3Q9BQT9 956 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TM6SF2Q9BZW4 377 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 INTS10Q9NVR2 710 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 MTRRQ9UBK8 725 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 TRMT6Q9UJA5 497 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 FCF1Q9Y324 198 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PCDHB9Q9Y5E1 797 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 COMMD10Q9Y6G5 202 aa6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 FNDC1Q4ZHG4 1894 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 PRRC2BQ5JSZ5 2229 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-203ENST00000422190 THSD7BQ9C0I4 1608 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms