RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 DRG1Q9Y295 367 aaKnown RBP10.48□□□□□ -0.73
RFC1-203ENST00000418436 ZNF711Q9Y462 761 aa10.48□□□□□ -0.73
RFC1-203ENST00000418436 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 TMEM202A6NGA9 273 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 CACNB4O00305 520 aaPredicted RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 CES2O00748 559 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 TNFRSF10CO14798 259 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 AURKAO14965 403 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 SDC3O75056 442 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 AGTP01019 485 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 FGF1P05230 155 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 PYGLP06737 847 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 PIRTP0C851 137 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 GIMD1P0DJR0 217 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 MYCLP1P12525 358 aaPredicted RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 MSNP26038 577 aaKnown RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 MSLNQ13421 630 aaPredicted RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 TRIP6Q15654 476 aaKnown RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 LONRF2Q1L5Z9 754 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ALG11Q2TAA5 492 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 INAVAQ3KP66 663 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 HENMT1Q5T8I9 393 aaKnown RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 PSAPL1Q6NUJ1 521 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ENPP7Q6UWV6 458 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ADAMTSL4Q6UY14 1074 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ARHGEF18Q6ZSZ5 1173 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 PHACTR4Q8IZ21 702 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 TTC30BQ8N4P2 665 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 SLC25A41Q8N5S1 370 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ATL2Q8NHH9 583 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 BTN2A2Q8WVV5 523 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 SCAMP4Q969E2 229 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 AGAP2Q99490 1192 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 CDC6Q99741 560 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 FICDQ9BVA6 458 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 RIOK2Q9BVS4 552 aaKnown RBP10.47□□□□□ -0.73
RFC1-203ENST00000418436 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 TRABDQ9H4I3 376 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 WDR26Q9H7D7 661 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ARNT2Q9HBZ2 717 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 HOMER3Q9NSC5 361 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 UCKL1Q9NWZ5 548 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 HACD3Q9P035 362 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 CD84Q9UIB8 345 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 SHOC2Q9UQ13 582 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 ZNF148Q9UQR1 794 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.47□□□□□ -0.73
RFC1-203ENST00000418436 CSNK1G3Q9Y6M4 447 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 DGKBQ9Y6T7 804 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
RFC1-203ENST00000418436 CNOT1A5YKK6 2376 aaKnown RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 H3BM21 787 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 SCAMP1O15126 338 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 KELP23276 732 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 HMGCLP35914 325 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 TNNT3P45378 269 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 GPR1P46091 355 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 BLKP51451 505 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 HK3P52790 923 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 DCDC1P59894 354 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 SRP54P61011 504 aaKnown RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 CDK3Q00526 305 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 PPARDQ03181 441 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 OLIG2Q13516 323 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 SNX1Q13596 522 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 KCTD16Q68DU8 428 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 RAET1GQ6H3X3 334 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 DENND5AQ6IQ26 1287 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 TRIM46Q7Z4K8 759 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 HEATR4Q86WZ0 1026 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 RBFAQ8N0V3 343 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 EID2Q8N6I1 236 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 PRELID2Q8N945 189 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 GPR26Q8NDV2 337 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 ZNF548Q8NEK5 533 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 OR56A4Q8NGH8 313 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 DTX3LQ8TDB6 740 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 ACTRT1Q8TDG2 376 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 COG1Q8WTW3 980 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 TSACCQ96A04 125 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 COX14Q96I36 57 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 MS4A14Q96JA4 679 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 OSBPL9Q96SU4 736 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 FSD1LQ9BXM9 530 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 FRMD8Q9BZ67 464 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 GPR63Q9BZJ6 419 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 CDH19Q9H159 772 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 TCEAL2Q9H3H9 227 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 PHPT1Q9NRX4 125 aaPredicted RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 FKBPLQ9UIM3 349 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 CNOT6Q9ULM6 557 aaKnown RBP10.46□□□□□ -0.73
RFC1-203ENST00000418436 SNX12Q9UMY4 172 aa10.46□□□□□ -0.73
RFC1-203ENST00000418436 MYLKQ15746 1914 aa10.46□□□□□ -0.74
RFC1-203ENST00000418436 SPAARA0A1B0GVQ0 90 aa10.45□□□□□ -0.74
RFC1-203ENST00000418436 GOLGA6CA6NDK9 693 aa10.45□□□□□ -0.74
RFC1-203ENST00000418436 GOLGA6BA6NDN3 693 aa10.45□□□□□ -0.74
RFC1-203ENST00000418436 NEMP2A6NFY4 417 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms