RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HPCAL4Q9UM19 191 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 LRRC42Q9Y546 428 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 GPR45Q9Y5Y3 372 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 RAD54BQ9Y620 910 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 ARHGEF17Q96PE2 2063 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 AKAP9Q99996 3911 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 CSMD2Q7Z408 3487 aa5.58□□□□□ -1.52
ECHDC1-206ENST00000417628 A0A088AWK7 358 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 TRAV19A0A0A6YYK7 116 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 A0A1B0GVM2 712 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 VSTM5A8MXK1 200 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 FAM86B1E9PN63 330 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 PODXLO00592 558 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 B4GALT5O43286 388 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNF254O75437 659 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 URI1O94763 535 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 YEATS4O95619 227 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 IL33O95760 270 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 LDHAP00338 332 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 PRLP01236 227 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 GP1BAP07359 652 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 PAEPP09466 180 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 FAM86B2P0C5J1 330 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 RARGP13631 454 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 C5AR1P21730 350 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 CD27P26842 260 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ATP5DP30049 168 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 STAT6P42226 847 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 STAT5AP42229 794 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 QARSP47897 775 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 GNGT1P63211 74 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ELF3P78545 371 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ALDH6A1Q02252 535 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 GPR17Q13304 367 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 MRPL49Q13405 166 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 MAPRE2Q15555 327 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 PLEKHN1Q494U1 663 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ZCWPW2Q504Y3 356 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 GLRA4Q5JXX5 417 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 TTC38Q5R3I4 469 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ADGRF1Q5T601 910 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 CD276Q5ZPR3 534 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ALS2CLQ60I27 953 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 SP5Q6BEB4 398 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 C8orf74Q6P047 294 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 PRIMA1Q86XR5 153 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ARFGAP2Q8N6H7 521 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 GLIS1Q8NBF1 620 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ATAD1Q8NBU5 361 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 MAPK15Q8TD08 544 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 BRSK1Q8TDC3 778 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 TMEM143Q96AN5 459 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 STAMBPL1Q96FJ0 436 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 PGBD1Q96JS3 809 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC2A13Q96QE2 648 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ACOX2Q99424 681 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 KLHL4Q9C0H6 718 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 DRC3Q9H069 523 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 CARD9Q9H257 536 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 CLSTN2Q9H4D0 955 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 C6orf106Q9H6K1 298 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 TRPC7Q9HCX4 862 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 KCNMB3Q9NPA1 279 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 GDF3Q9NR23 364 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ATAD3AQ9NVI7 634 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 FAIMQ9NVQ4 179 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 UCKL1Q9NWZ5 548 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 HSFX1Q9UBD0 423 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 CDC23Q9UJX2 597 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 ENTPD2Q9Y5L3 495 aa5.57□□□□□ -1.52
ECHDC1-206ENST00000417628 MYH9P35579 1960 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 FN1P02751 2386 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 IGLV3-22A0A075B6J6 115 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 CCDC187A0A096LP49 1063 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 DPPA5A6NC42 116 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 OR6C75A6NL08 312 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 EFCAB7A8K855 629 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 E7EVH7 732 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 HAT1O14929 419 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ASAP2O43150 1006 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TACC1O75410 805 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 SIX3O95343 332 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 WNT1P04628 370 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 LPLP06858 475 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ZSCAN22P10073 491 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ACADMP11310 421 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 OSMP13725 252 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 ATF6P18850 670 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 M6PRP20645 277 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 SFNP31947 248 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 HALP42357 657 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 LEPRP48357 1165 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 TUFMP49411 452 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 JAK3P52333 1124 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 BCAT1P54687 386 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 PTENP60484 403 aa5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-206ENST00000417628 HPCAP84074 193 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms