RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ITIH2P19823 946 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 CD82P27701 267 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 YPEL5P62699 121 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 C16orf72Q14CZ0 275 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 TFDP3Q5H9I0 405 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 LVRNQ6Q4G3 990 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 SLITRK4Q8IW52 837 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 FSTL5Q8N475 847 aaPredicted RBP17.97■□□□□ 0.47
VCP-202ENST00000417448 RNF10Q8N5U6 811 aaKnown RBP17.97■□□□□ 0.47
VCP-202ENST00000417448 TSACCQ96A04 125 aaPredicted RBP17.97■□□□□ 0.47
VCP-202ENST00000417448 TMEM159Q96B96 161 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 GDAP1L1Q96MZ0 367 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 KLHL32Q96NJ5 620 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 CMKLR1Q99788 373 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 CEP41Q9BYV8 373 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 C10orf88Q9H8K7 445 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 NT5MQ9NPB1 228 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
VCP-202ENST00000417448 GPR34Q9UPC5 381 aa17.97■□□□□ 0.47
VCP-202ENST00000417448 ARHGEF17Q96PE2 2063 aaPredicted RBP17.96■□□□□ 0.47
VCP-202ENST00000417448 CCDC66A2RUB6 948 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 C16orf96A6NNT2 1141 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 POP4O95707 220 aaKnown RBP17.96■□□□□ 0.47
VCP-202ENST00000417448 HK3P52790 923 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 RWDD2BP57060 319 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 ELOCQ15369 112 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 ALG11Q2TAA5 492 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 TMCO4Q5TGY1 634 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 KCTD16Q68DU8 428 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 SRLQ86TD4 932 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 HID1Q8IV36 788 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 REXO1L1PQ8IX06 675 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 SYCE1Q8N0S2 351 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 GPR156Q8NFN8 814 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 SCG3Q8WXD2 468 aaKnown RBP17.96■□□□□ 0.47
VCP-202ENST00000417448 CASKIN2Q8WXE0 1202 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 NKD1Q969G9 470 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 MIB2Q96AX9 1013 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 RBM41Q96IZ5 413 aaKnown RBP17.96■□□□□ 0.47
VCP-202ENST00000417448 CALR3Q96L12 384 aaKnown RBP17.96■□□□□ 0.47
VCP-202ENST00000417448 SEMA6CQ9H3T2 930 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 PLEKHB1Q9UF11 243 aaPredicted RBP17.96■□□□□ 0.47
VCP-202ENST00000417448 APPL1Q9UKG1 709 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 PYCARDQ9ULZ3 195 aa17.96■□□□□ 0.47
VCP-202ENST00000417448 CRYBG3Q68DQ2 2970 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 CELSR2Q9HCU4 2923 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 ZNF487B1APH4 448 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 STMND1H3BQB6 276 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 KCNK1O00180 336 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 NEMP1O14524 444 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 PRKCGP05129 697 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 ALPIP09923 528 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 CCL4P13236 92 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 LIFP15018 202 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 CCR10P46092 362 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 SCNN1BP51168 640 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 AP1B1Q10567 949 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 ZNF235Q14590 738 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 GDPD4Q6W3E5 623 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 SPRED1Q7Z699 444 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 CAMK1DQ8IU85 385 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
VCP-202ENST00000417448 OSBPL8Q9BZF1 889 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 CSMD1Q96PZ7 3565 aa17.95■□□□□ 0.46
VCP-202ENST00000417448 CXorf51AA0A1B0GTR3 108 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 ENO4A6NNW6 628 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 USP27XA6NNY8 438 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 AREL1O15033 823 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 JCHAINP01591 159 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 MMP13P45452 471 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 BLKP51451 505 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 ITKQ08881 620 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 TFDP2Q14188 446 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 CERCAMQ5T4B2 595 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 PHF19Q5T6S3 580 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 MARC1Q5VT66 337 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 ZC3H18Q86VM9 953 aaKnown RBP17.94■□□□□ 0.46
VCP-202ENST00000417448 VSIG1Q86XK7 387 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 PLPP6Q8IY26 295 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 OR6C4Q8NGE1 309 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 C9orf43Q8TAL5 461 aaPredicted RBP17.94■□□□□ 0.46
VCP-202ENST00000417448 RAB7BQ96AH8 199 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 HES6Q96HZ4 224 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 ZNF599Q96NL3 588 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 RBM22Q9NW64 420 aaKnown RBP eCLIP17.94■□□□□ 0.46
VCP-202ENST00000417448 TTLL3Q9Y4R7 772 aa17.94■□□□□ 0.46
VCP-202ENST00000417448 ABCA12Q86UK0 2595 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 TCRBV7S2A1N4TA0A589 114 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 MATN3O15232 486 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 MMP20O60882 483 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 CTSEP14091 401 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 ZFXP17010 805 aaPredicted RBP17.93■□□□□ 0.46
VCP-202ENST00000417448 CCNCP24863 283 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 CD97P48960 835 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 ZBTB17Q13105 803 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 IHHQ14623 411 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 IRF4Q15306 451 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 ZNF805Q5CZA5 627 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 CCDC181Q5TID7 509 aa17.93■□□□□ 0.46
VCP-202ENST00000417448 ZNF662Q6ZS27 426 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms