RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PFDN2Q9UHV9 154 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 AP3M1Q9Y2T2 418 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 PGK1P00558 417 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 S100A6P06703 90 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PDHA2P29803 388 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 TTPAP49638 278 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 GNA12Q03113 381 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 IQCF2Q8IXL9 164 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PYROXD2Q8N2H3 581 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 ZNF433Q8N7K0 673 aaPredicted RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 C4orf32Q8N8J7 132 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 KAT2AQ92830 837 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 C11orf24Q96F05 449 aaPredicted RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 AGAP2Q99490 1192 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 RBM4BQ9BQ04 359 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 TCF25Q9BQ70 676 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 ACAT2Q9BWD1 397 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 RBM4Q9BWF3 364 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 ZYG11BQ9C0D3 744 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 DNAAF2Q9NVR5 837 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 GRIN2DO15399 1336 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 AMHP03971 560 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 MTHFD1P11586 935 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 RNASEH2BQ5TBB1 312 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 GHDCQ8N2G8 530 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 EBPLQ9BY08 206 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PIGUQ9H490 435 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 IFNA16P05015 189 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 ZYG11AQ6WRX3 759 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 CDK5RAP1Q96SZ6 601 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 RAB23Q9ULC3 237 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PGRMC2O15173 223 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 TBX1O43435 398 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 AIREO43918 545 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 MTA2O94776 668 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 COL6A1P12109 1028 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 S100A1P23297 94 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 FCGRTP55899 365 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 NOMO1Q15155 1222 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 CPXM1Q96SM3 734 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 P2RX7Q99572 595 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 FBXO10Q9UK96 956 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 GPSM3Q9Y4H4 160 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 A0A075B6Q4 140 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PRAMEF33A0A0G2JMD5 474 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 FFAR2O15552 330 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 ITM2AO43736 263 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 PRAMEF10O60809 474 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 UBA1P22314 1058 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 ADORA2AP29274 412 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 RAB25P57735 213 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 SRSF11Q05519 484 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 P2RY8Q86VZ1 359 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 GALNT15Q8N3T1 639 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 CD101Q93033 1021 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 MED28Q9H204 178 aa12.01□□□□□ -0.49
UBR4-205ENST00000417040 LIN28AQ9H9Z2 209 aaKnown RBP12.01□□□□□ -0.49
UBR4-205ENST00000417040 IPO13O94829 963 aaKnown RBP12□□□□□ -0.49
UBR4-205ENST00000417040 CCNDBP1O95273 360 aa12□□□□□ -0.49
UBR4-205ENST00000417040 TGDSO95455 350 aa12□□□□□ -0.49
UBR4-205ENST00000417040 LGALS2P05162 132 aa12□□□□□ -0.49
UBR4-205ENST00000417040 NMBRP28336 390 aa12□□□□□ -0.49
UBR4-205ENST00000417040 SERPINA4P29622 427 aa12□□□□□ -0.49
UBR4-205ENST00000417040 NFE2Q16621 373 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 HKDC1Q2TB90 917 aa12□□□□□ -0.49
UBR4-205ENST00000417040 PLET1Q6UQ28 207 aa12□□□□□ -0.49
UBR4-205ENST00000417040 C7orf26Q96N11 449 aa12□□□□□ -0.49
UBR4-205ENST00000417040 ZNF570Q96NI8 536 aa12□□□□□ -0.49
UBR4-205ENST00000417040 CDT1Q9H211 546 aa12□□□□□ -0.49
UBR4-205ENST00000417040 SGK2Q9HBY8 427 aa12□□□□□ -0.49
UBR4-205ENST00000417040 CCNB1IP1Q9NPC3 277 aa12□□□□□ -0.49
UBR4-205ENST00000417040 GIN1Q9NXP7 522 aa12□□□□□ -0.49
UBR4-205ENST00000417040 CORO2BQ9UQ03 480 aa12□□□□□ -0.49
UBR4-205ENST00000417040 SLIT1O75093 1534 aa12□□□□□ -0.49
UBR4-205ENST00000417040 BBIP1A8MTZ0 92 aa12□□□□□ -0.49
UBR4-205ENST00000417040 H3BSA7 217 aa12□□□□□ -0.49
UBR4-205ENST00000417040 RTN3O95197 1032 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 CSH1P0DML2 217 aa12□□□□□ -0.49
UBR4-205ENST00000417040 CSH2P0DML3 217 aa12□□□□□ -0.49
UBR4-205ENST00000417040 NADK2Q4G0N4 442 aa12□□□□□ -0.49
UBR4-205ENST00000417040 COLEC12Q5KU26 742 aa12□□□□□ -0.49
UBR4-205ENST00000417040 RAET1GQ6H3X3 334 aa12□□□□□ -0.49
UBR4-205ENST00000417040 TXNDC11Q6PKC3 985 aa12□□□□□ -0.49
UBR4-205ENST00000417040 NIPA1Q7RTP0 329 aa12□□□□□ -0.49
UBR4-205ENST00000417040 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
UBR4-205ENST00000417040 TRNT1Q96Q11 434 aaKnown RBP12□□□□□ -0.49
UBR4-205ENST00000417040 MCMBPQ9BTE3 642 aa12□□□□□ -0.49
UBR4-205ENST00000417040 DSN1Q9H410 356 aa12□□□□□ -0.49
UBR4-205ENST00000417040 STOML2Q9UJZ1 356 aa12□□□□□ -0.49
UBR4-205ENST00000417040 POMPQ9Y244 141 aa12□□□□□ -0.49
UBR4-205ENST00000417040 PPP2R3BQ9Y5P8 575 aa12□□□□□ -0.49
UBR4-205ENST00000417040 H3BMM5 538 aa12□□□□□ -0.49
UBR4-205ENST00000417040 PHC1P78364 1004 aa12□□□□□ -0.49
UBR4-205ENST00000417040 GBE1Q04446 702 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms