RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 C2orf81A6NN90 581 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 CXorf49A8MYA2 514 aaPredicted RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 H0Y858 1186 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 H0Y8X5 98 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 NDC80O14777 642 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 ZNF217O75362 1048 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 TM7SF2O76062 418 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 VAPBO95292 243 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 ACSL3O95573 720 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 CRTAMO95727 393 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PAK4O96013 591 aaPredicted RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 ERVK-10P10266 1014 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PSMA3P25788 255 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 MAOBP27338 520 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 MC4RP32245 332 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 FOXN2P32314 431 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 HMGCLP35914 325 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 SPAM1P38567 509 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 ABCG1P45844 678 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 SUOXP51687 545 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PTPN5P54829 565 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 CLDN2P57739 230 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 TUBB4BP68371 445 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 RPL6Q02878 288 aaKnown RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 CBLBQ13191 982 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 KHDC1Q4VXA5 237 aaKnown RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 TPRG1LQ5T0D9 272 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 HENMT1Q5T8I9 393 aaKnown RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 KCTD16Q68DU8 428 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 KIAA0930Q6ICG6 404 aaPredicted RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 KIAA1161Q6NSJ0 714 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PTAR1Q7Z6K3 402 aaPredicted RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 LONP2Q86WA8 852 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 TRIM69Q86WT6 500 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PIANPQ8IYJ0 282 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 TMEFF1Q8IYR6 380 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 EIF1ADQ8N9N8 165 aaKnown RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
MDC1-203ENST00000417033 PYROXD1Q8WU10 500 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 SNX19Q92543 992 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 NELL1Q92832 810 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 BIRC7Q96CA5 298 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 LRRC39Q96DD0 335 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 CDKN2AIPNLQ96HQ2 116 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 HSPA12BQ96MM6 686 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 KLF6Q99612 283 aaPredicted RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PHACTR1Q9C0D0 580 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 VPS37BQ9H9H4 285 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 PKD2L2Q9NZM6 624 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 PKP3Q9Y446 797 aa8.03□□□□□ -1.12
MDC1-203ENST00000417033 ATXN2Q99700 1313 aaKnown RBP8.03□□□□□ -1.12
MDC1-203ENST00000417033 PLXNA2O75051 1894 aa8.02□□□□□ -1.12
MDC1-203ENST00000417033 GON4LQ3T8J9 2241 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 SDK1Q7Z5N4 2213 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 GLYATL1P3A0A0U1RQE8 302 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 TCRBV9S1A1TA0A576 114 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 METTL12A8MUP2 240 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 AP3B1O00203 1094 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 PSMD11O00231 422 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 INPP4BO15327 924 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 RIPK2O43353 540 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 LATO43561 262 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 NDUFS2O75306 463 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 MTX2O75431 263 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 USP1O94782 785 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 PRAMEF1O95521 474 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 SHBGP04278 402 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 OXTRP30559 389 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 PTGER3P43115 390 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 PMS2P54278 862 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 RPS21P63220 83 aaKnown RBP8.02□□□□□ -1.13
MDC1-203ENST00000417033 MPP1Q00013 466 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 CREB5Q02930 508 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 ATP13A5Q4VNC0 1218 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 USP39Q53GS9 565 aaKnown RBP8.02□□□□□ -1.13
MDC1-203ENST00000417033 ZRANB3Q5FWF4 1079 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 ZNF789Q5FWF6 425 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 SPANXN3Q5MJ09 141 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 RAET1GQ6H3X3 334 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 FBXO38Q6PIJ6 1188 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 GCNT7Q6ZNI0 430 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 KCNMB4Q86W47 210 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 RELL1Q8IUW5 271 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 DENND6AQ8IWF6 608 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 OR6P1Q8NGX9 317 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 GSDMBQ8TAX9 411 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 FBF1Q8TES7 1133 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 CAVIN3Q969G5 261 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 AP2M1Q96CW1 435 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 CERS2Q96G23 380 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 SLC6A18Q96N87 628 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 LENG8Q96PV6 779 aaPredicted RBP8.02□□□□□ -1.13
MDC1-203ENST00000417033 SPATA16Q9BXB7 569 aa8.02□□□□□ -1.13
MDC1-203ENST00000417033 SLC17A9Q9BYT1 436 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms