RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MMP2P08253 660 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 JMJD7P0C870 316 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 SLC5A2P31639 672 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 ACTR1BP42025 376 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 CD86P42081 329 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 SLC1A1P43005 524 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 ACTR1AP61163 376 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 RHDQ02161 417 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 VAC14Q08AM6 782 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 NR1D2Q14995 579 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 PDK1Q15118 436 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 QPCTQ16769 361 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 PYCR3Q53H96 274 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 ODF2Q5BJF6 829 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 PIM3Q86V86 326 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 NAGSQ8N159 534 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 CCHCR1Q8TD31 782 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 SNRNP27Q8WVK2 155 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 COX14Q96I36 57 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 AGAP2Q99490 1192 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 ADGRE3Q9BY15 652 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 PKD2L2Q9NZM6 624 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 INTUQ9ULD6 942 aa17.49■□□□□ 0.39
PDLIM2-208ENST00000416159 C1orf232A0A0U1RR37 186 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 RGSL1A5PLK6 1076 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 C3orf70A6NLC5 250 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 ANKRD66B4E2M5 251 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 ASMTLO95671 621 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 CPNE6O95741 557 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 ALDH4A1P30038 563 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 GPR3P46089 330 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 SPINT3P49223 89 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 OR1D5P58170 312 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 AP1B1Q10567 949 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 MAP9Q49MG5 647 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 TRIM74Q86UV6 250 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 JAMLQ86YT9 394 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 GALNT13Q8IUC8 556 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 CNGA4Q8IV77 575 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 SLITRK4Q8IW52 837 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 CNTD1Q8N815 330 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 CMKLR1Q99788 373 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 FAM83DQ9H4H8 585 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 DDX56Q9NY93 547 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 AKAP7Q9P0M2 348 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 PISDQ9UG56 409 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 ACSL6Q9UKU0 697 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 PLEKHM1Q9Y4G2 1056 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 ST14Q9Y5Y6 855 aa17.48■□□□□ 0.39
PDLIM2-208ENST00000416159 AHCTF1Q8WYP5 2266 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 AKR1B15C9JRZ8 316 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 ERVH48-1M5A8F1 160 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 PPP1R12AO14974 1030 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 INPP4BO15327 924 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 NVLO15381 856 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 KRT1P04264 644 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 HGFP14210 728 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 ZBTB17Q13105 803 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 CLN3Q13286 438 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 LRP8Q14114 963 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 TCEAL1Q15170 157 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 AMZ1Q400G9 498 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 PHF19Q5T6S3 580 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 MARK2Q7KZI7 788 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 NT5DC3Q86UY8 548 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 RHOT1Q8IXI2 618 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 WBP1Q96G27 269 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 WDR24Q96S15 920 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 VPS18Q9P253 973 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 SCN8AQ9UQD0 1980 aa17.47■□□□□ 0.39
PDLIM2-208ENST00000416159 ZFC3H1O60293 1989 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 C19orf57Q0VDD7 668 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 HENMT1Q5T8I9 393 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 CCDC81Q6ZN84 652 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 USP53Q70EK8 1073 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 BZW1Q7L1Q6 419 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 TMPRSS9Q7Z410 1059 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 RNF214Q8ND24 703 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 PATE1Q8WXA2 126 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 RNF25Q96BH1 459 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 IMP4Q96G21 291 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 OLFM3Q96PB7 478 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 DPYSL5Q9BPU6 564 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 SLC25A51Q9H1U9 297 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 SEMA6CQ9H3T2 930 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 RMI1Q9H9A7 625 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 RDH14Q9HBH5 336 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 ZNHIT2Q9UHR6 403 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 CNOT6Q9ULM6 557 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 BAHCC1Q9P281 2608 aa17.46■□□□□ 0.39
PDLIM2-208ENST00000416159 BPTFQ12830 3046 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 K7ENP7 123 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 PPM1DO15297 605 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 DNAJC6O75061 913 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 CD1CP29017 333 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 SQSTM1Q13501 440 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 SLC14A2Q15849 920 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 TAF1BQ53T94 588 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms