RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DHDHQ9UQ10 334 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 PIN4Q9Y237 131 aaKnown RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 R3HDM2Q9Y2K5 976 aaKnown RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 AAR2Q9Y312 384 aaKnown RBP4.57□□□□□ -1.68
BRCA1-204ENST00000412061 PKP3Q9Y446 797 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 INSL6Q9Y581 213 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 NFS1Q9Y697 457 aa4.57□□□□□ -1.68
BRCA1-204ENST00000412061 HTR3EA5X5Y0 456 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 SLC33A1O00400 549 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 SEC14L5O43304 696 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 VEGFDO43915 354 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 NOL3O60936 208 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 RNF8O76064 485 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TRUB2O95900 331 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 SERPINC1P01008 464 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 GBAP04062 536 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 AKR1A1P14550 325 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 IL10P22301 178 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ACHEP22303 614 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 IDUAP35475 653 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ACVRL1P37023 503 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 IL15P40933 162 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF81P51508 661 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 NME5P56597 212 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 STX1BP61266 288 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 YPEL5P62699 121 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 YWHAZP63104 245 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ZXDAP98168 799 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 DPTQ07507 201 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TEFQ10587 303 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 RRS1Q15050 365 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 RABEP1Q15276 862 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 DLG2Q15700 870 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 HIST2H2ACQ16777 129 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 PROSER3Q2NL68 480 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 MYLK3Q32MK0 819 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ISLR2Q6UXK2 745 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TAOK1Q7L7X3 1001 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 PPP1R42Q7Z4L9 355 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TFAP2DQ7Z6R9 452 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 CHSY1Q86X52 802 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ANKRD13BQ86YJ7 626 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 DHX40Q8IX18 779 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 PNLDC1Q8NA58 520 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TSPAN14Q8NG11 270 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 FAM110DQ8TAY7 271 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 HASPINQ8TF76 798 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TMEM68Q96MH6 324 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF830Q96NB3 372 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 PARK7Q99497 189 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 PIMREGQ9BSJ6 248 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 GATA5Q9BWX5 397 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 C1QTNF1Q9BXJ1 281 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 TMEM248Q9NWD8 314 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 PAG1Q9NWQ8 432 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 ARL15Q9NXU5 204 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 APPL1Q9UKG1 709 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 CDH7Q9ULB5 785 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 EXO1Q9UQ84 846 aaKnown RBP4.56□□□□□ -1.68
BRCA1-204ENST00000412061 CHKBQ9Y259 395 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 SYNRGQ9UMZ2 1314 aa4.56□□□□□ -1.68
BRCA1-204ENST00000412061 A0A1W2PR77 199 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 TARSL2A2RTX5 802 aaKnown RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 RRHO14718 337 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 GPC4O75487 556 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 CELF2O95319 508 aaKnown RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 TFP02787 698 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 FERP16591 822 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 CCNA2P20248 432 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 HSPA4P34932 840 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 CRKLP46109 303 aaKnown RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 RABIFP47224 123 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ASIC1P78348 528 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 GRSF1Q12849 480 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 KLF10Q13118 480 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 DRAP1Q14919 205 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 PDK1Q15118 436 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 PCGF3Q3KNV8 242 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 PRAMEF17Q5VTA0 474 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 SFMBT2Q5VUG0 894 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 TMEM198Q66K66 360 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 FCRLBQ6BAA4 426 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ETFRF1Q6IPR1 90 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 AADACL2Q6P093 401 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ZNF474Q6S9Z5 364 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 KCTD9Q7L273 389 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 MDGA2Q7Z553 956 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 SPATA21Q7Z572 469 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 ZER1Q7Z7L7 766 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 NEK8Q86SG6 692 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 MFN1Q8IWA4 741 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 SCYL3Q8IZE3 742 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 PAQR4Q8N4S7 273 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-204ENST00000412061 EXD3Q8N9H8 876 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 FAM47BQ8NA70 645 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 KDM1BQ8NB78 822 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 OR52N4Q8NGI2 321 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 CFAP61Q8NHU2 1237 aa4.55□□□□□ -1.68
BRCA1-204ENST00000412061 FBXO30Q8TB52 745 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms