RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 UBXN6Q9BZV1 441 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 TRIM15Q9C019 465 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 WDR13Q9H1Z4 485 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 BICC1Q9H694 974 aaKnown RBP1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 ERVMER34-1Q9H9K5 563 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 FGF22Q9HCT0 170 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 HINT3Q9NQE9 182 aaKnown RBP1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 CCDC177Q9NQR7 707 aaPredicted RBP1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 KIAA1456Q9P272 454 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 KIF17Q9P2E2 1029 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 KLHL9Q9P2J3 617 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 CARD8Q9Y2G2 431 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 DAAM1Q9Y4D1 1078 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 COL5A2P05997 1499 aaPredicted RBP1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 PTPRCP08575 1304 aa1.36□□□□□ -2.19
RNU2-55P-201ENST00000411146 A0A0J9YWU9 116 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 A6NL46 340 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 F5H423 210 aaPredicted RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 EIF3DO15371 548 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SYNGR3O43761 229 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MTA2O94776 668 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 KCNK5O95279 499 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 EGFP01133 1207 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 NGFP01138 241 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MYL1P05976 194 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TPOP07202 933 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 GALTP07902 379 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TNNT1P13805 278 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 DPEP1P16444 411 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 CHKAP35790 457 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 AMPHP49418 695 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 HOXA1P49639 335 aaPredicted RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MMP14P50281 582 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 CLDN20P56880 219 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 ACTR2P61160 394 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 YWHAZP63104 245 aaKnown RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SP3Q02447 781 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MBTD1Q05BQ5 628 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 GOLGA8FQ08AF8 430 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TBL3Q12788 808 aaKnown RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 BLMHQ13867 455 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 VEPH1Q14D04 833 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TAF11Q15544 211 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 COL28A1Q2UY09 1125 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 CCNYL2Q5T2Q4 361 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 KCTD18Q6PI47 426 aaPredicted RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 C1orf228Q6PIY5 440 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 BRAT1Q6PJG6 821 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 PLXDC2Q6UX71 529 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 STXBP4Q6ZWJ1 553 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 LINGO2Q7L985 606 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TADA2BQ86TJ2 420 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TMEM57Q8N5G2 664 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MYCT1Q8N699 235 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 BEST2Q8NFU1 509 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 HCAR2Q8TDS4 363 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 GRHL3Q8TE85 626 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 PPM1EQ8WY54 764 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 THAP4Q8WY91 577 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SDCCAG3Q96C92 435 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 ARHGEF26Q96DR7 871 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MOCOSQ96EN8 888 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SLC39A13Q96H72 371 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SYT11Q9BT88 431 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 FAM167BQ9BTA0 163 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TAOK3Q9H2K8 898 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 PLEKHA4Q9H4M7 779 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 METTL14Q9HCE5 456 aaKnown RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SAYSD1Q9NPB0 183 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 ITM2CQ9NQX7 267 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 MAP3K20Q9NYL2 800 aaKnown RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 IL1RAPL1Q9NZN1 696 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 TTC7AQ9ULT0 858 aaPredicted RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 KLHL20Q9Y2M5 609 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 GDAQ9Y2T3 454 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 RRP7AQ9Y3A4 280 aaKnown RBP1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 SHROOM4Q9ULL8 1493 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 FLT1P17948 1338 aa1.35□□□□□ -2.19
RNU2-55P-201ENST00000411146 ATRXP46100 2492 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 PRAG1Q86YV5 1406 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 NDUFAF8A1L188 74 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 NCAM2O15394 837 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 PI15O43692 258 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 SEC31AO94979 1220 aaKnown RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 DUS4LO95620 317 aaKnown RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 MT-CYBP00156 380 aaPredicted RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 CNPP09543 421 aaKnown RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 IFIT2P09913 472 aaKnown RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 FAM106CPP0CH98 169 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 PCNAP12004 261 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 APOBEC1P41238 236 aaKnown RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 TAS2R38P59533 333 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 EFNB1P98172 346 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 NAE1Q13564 534 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 KRT72Q14CN4 511 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 PPP2R5BQ15173 497 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 RNPS1Q15287 305 aaKnown RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 ADAMTSL4-AS1Q5T5F5 129 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 LCE1CQ5T751 118 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms