RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 KIAA0895Q8NCT3 520 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 COQ8BQ96D53 544 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 RBM18Q96H35 190 aaKnown RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 FANCFQ9NPI8 374 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 POU2F3Q9UKI9 436 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 KCNE2Q9Y6J6 123 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 A0A1W2PQH9 124 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 PGRMC2O15173 223 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 HCN1O60741 890 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 NFATC1O95644 943 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 LPOP22079 712 aaPredicted RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 NFATC2Q13469 925 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 IL18Q14116 193 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 TLR1Q15399 786 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 TAPBPLQ9BX59 468 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 SSR3Q9UNL2 185 aa11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 HBS1LQ9Y450 684 aaKnown RBP11.21□□□□□ -0.62
PRPF40A-202ENST00000410080 ENPP3O14638 875 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SERPINE1P05121 402 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 PRKAA2P54646 552 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ZBTB6Q15916 424 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 LRRC73Q5JTD7 316 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 GALNT5Q7Z7M9 940 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MCOLN2Q8IZK6 566 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 GSDMCQ9BYG8 508 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 CCDC162PA2VCL2 907 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 G3V2T6 193 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 OR1F1O43749 312 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 GATBO75879 557 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 LTA4HP09960 611 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 RBL1P28749 1068 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ECH1Q13011 328 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 LARS2Q15031 903 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 EXOSC8Q96B26 276 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 CCDC115Q96NT0 180 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 RWDD3Q9Y3V2 267 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 FAM86C2PA6NEL3 165 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 PROSCO94903 275 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 INMTO95050 263 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 GJB1P08034 283 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC7A1P30825 629 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 FLT3LGP49771 235 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 DLG4P78352 724 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ABATP80404 500 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ZNF613Q6PF04 617 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 GPRIN3Q6ZVF9 776 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 C12orf56Q8IXR9 622 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 OR2AJ1Q8NGZ0 328 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ADAMTS15Q8TE58 950 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 TOP1MTQ969P6 601 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 C3orf18Q9UK00 162 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MAPRE3Q9UPY8 281 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SAMHD1Q9Y3Z3 626 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 POLR3HQ9Y535 204 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 C1RP00736 705 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 FAM153CQ494X1 144 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ATXN7L2Q5T6C5 722 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC8B1Q6J4K2 584 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 GHDCQ8N2G8 530 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MYCBPAPQ8TBZ2 947 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC22A8Q8TCC7 542 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 TNFAIP8O95379 198 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 AGXTP21549 392 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MAPK8P45983 427 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MRPS22P82650 360 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 PTPRNQ16849 979 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MOXD1Q6UVY6 613 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 HSDL2Q6YN16 418 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 CHST15Q7LFX5 561 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 PCDH20Q8N6Y1 951 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 AP3S1Q92572 193 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 EML1O00423 815 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 BTN3A2P78410 334 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SPIRE1Q08AE8 756 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 ATP13A5Q4VNC0 1218 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 SLC9A9Q8IVB4 645 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 DENND6BQ8NEG7 585 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 MYO19Q96H55 970 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 TBC1D30Q9Y2I9 924 aa11.2□□□□□ -0.62
PRPF40A-202ENST00000410080 TAS2R50P59544 299 aa11.19□□□□□ -0.62
PRPF40A-202ENST00000410080 GMFBP60983 142 aa11.19□□□□□ -0.62
PRPF40A-202ENST00000410080 ADRM1Q16186 407 aa11.19□□□□□ -0.62
PRPF40A-202ENST00000410080 RBFAQ8N0V3 343 aa11.19□□□□□ -0.62
PRPF40A-202ENST00000410080 ETNK2Q9NVF9 386 aa11.19□□□□□ -0.62
PRPF40A-202ENST00000410080 PDP2Q9P2J9 529 aa11.19□□□□□ -0.62
PRPF40A-202ENST00000410080 PCDHGA6Q9Y5G7 932 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms