RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 AAGABQ6PD74 315 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 C16orf87Q6PH81 154 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 UNC5AQ6ZN44 842 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CEP97Q8IW35 865 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLC44A3Q8N4M1 653 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CNTD1Q8N815 330 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 P3H4Q92791 437 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 ZNF597Q96LX8 424 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 NUF2Q9BZD4 464 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 TOR3AQ9H497 397 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 EHD1Q9H4M9 534 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 COG4Q9H9E3 785 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLC38A10Q9HBR0 1119 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 AVENQ9NQS1 362 aaPredicted RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 OLFML3Q9NRN5 406 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 PARVAQ9NVD7 372 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 IL17BQ9UHF5 180 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SIX4Q9UIU6 781 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 PLIN4Q96Q06 1357 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 NOTCH2Q04721 2471 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SPOPO43791 374 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CCDC22O60826 627 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DKC1O60832 514 aaKnown RBP eCLIP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 OPHN1O60890 802 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SEC24DO94855 1032 aaPredicted RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 INMTO95050 263 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 BMP15O95972 392 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CYP1A2P05177 515 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 C1SP09871 688 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 ERVK-10P10266 1014 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 NCK1P16333 377 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 ZNF23P17027 643 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 POLR2BP30876 1174 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 OPRD1P41143 372 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CETN2P41208 172 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DIO3P55073 304 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SCAPQ12770 1279 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 NFX1Q12986 1120 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 KLF10Q13118 480 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 RAB39AQ14964 217 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLC44A4Q53GD3 710 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 PXDC1Q5TGL8 231 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DHRS4L2Q6PKH6 230 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 P2RY8Q86VZ1 359 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SPATS2Q86XZ4 545 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CLVS1Q8IUQ0 354 aaPredicted RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 GLB1L3Q8NCI6 653 aaPredicted RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 PMEPA1Q969W9 287 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 TTC25Q96NG3 672 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 GBP5Q96PP8 586 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLITRK1Q96PX8 696 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 ACOX2Q99424 681 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CTRCQ99895 268 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 ANO3Q9BYT9 981 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLIRPQ9GZT3 109 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 NRDE2Q9H7Z3 1164 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CNNM2Q9H8M5 875 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CNOT10Q9H9A5 744 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 TMEM9BQ9NQ34 198 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SERPINB13Q9UIV8 391 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 STRIP2Q9ULQ0 834 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 MED16Q9Y2X0 877 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SH3GLB1Q9Y371 365 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SNX10Q9Y5X0 201 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CCDC160A6NGH7 325 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 H3BNH8 94 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 INPP4BO15327 924 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 PHGDHO43175 533 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 MTA2O94776 668 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 APRTP07741 180 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SYPP08247 313 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DDX5P17844 614 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 RPL17P18621 184 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 IL12AP29459 219 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 HADHAP40939 763 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 RPL5P46777 297 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SEPHS1P49903 392 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 GPC5P78333 572 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DMPKQ09013 629 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLC14A1Q13336 389 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 LAPTM5Q13571 262 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SLMAPQ14BN4 828 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 ZACNQ401N2 412 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DGKKQ5KSL6 1271 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 OTUD1Q5VV17 481 aaPredicted RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 EGFLAMQ63HQ2 1017 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 FRMPD2BQ6IN97 320 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 FAM160B2Q86V87 743 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SNX32Q86XE0 403 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DSELQ8IZU8 1212 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 TMTC2Q8N394 836 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 CBR4Q8N4T8 237 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 SAMD3Q8N6K7 520 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 NPWQ8N729 165 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 OR4M2Q8NGB6 313 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 KCNA7Q96RP8 456 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DCLRE1CQ96SD1 692 aaKnown RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 DOK1Q99704 481 aa3.12□□□□□ -1.91
RGPD3-202ENST00000409886 MS4A7Q9GZW8 240 aaPredicted RBP3.12□□□□□ -1.91
RGPD3-202ENST00000409886 HOXD1Q9GZZ0 328 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms