RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 KCTD11Q693B1 232 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 RANBP10Q6VN20 620 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 RFLNAQ6ZTI6 216 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 RD3Q7Z3Z2 195 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 RBFAQ8N0V3 343 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 PELI3Q8N2H9 469 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 TRAM1L1Q8N609 369 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 BRSK1Q8TDC3 778 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 SCG3Q8WXD2 468 aaKnown RBP10.85□□□□□ -0.67
CHMP3-205ENST00000409810 GLMNQ92990 594 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 TSACCQ96A04 125 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-205ENST00000409810 PDXPQ96GD0 296 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 HIC2Q96JB3 615 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 PLEKHG4BQ96PX9 1271 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 NAPGQ99747 312 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-205ENST00000409810 LRRC61Q9BV99 259 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 FGF22Q9HCT0 170 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 NCKIPSDQ9NZQ3 722 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 KLF15Q9UIH9 416 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 SNX12Q9UMY4 172 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 SPO11Q9Y5K1 396 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 SPAARA0A1B0GVQ0 90 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 TMEM202A6NGA9 273 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 LMO7DNF2Z398 122 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 INPP4BO15327 924 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 STX7O15400 261 aaKnown RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ASMTLO95671 621 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 SOD1P00441 154 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ADRB1P08588 477 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 CDK4P11802 303 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 BPIP17213 487 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 LPOP22079 712 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 DUSP3P51452 185 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 DAB2P98082 770 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ITGA9Q13797 1035 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ALS2CLQ60I27 953 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ZCCHC8Q6NZY4 707 aaKnown RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 DOK6Q6PKX4 331 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 SLC25A45Q8N413 288 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 TTC30BQ8N4P2 665 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 DTX3LQ8TDB6 740 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ACTRT1Q8TDG2 376 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 GRK7Q8WTQ7 553 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 OR1E3Q8WZA6 343 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 MAGOHBQ96A72 148 aaKnown RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 EID2BQ96D98 161 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 COX14Q96I36 57 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 APOL2Q9BQE5 337 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 LGR4Q9BXB1 951 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 FRMD8Q9BZ67 464 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 CARS2Q9HA77 564 aaKnown RBP10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ETNK1Q9HBU6 452 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 ARNT2Q9HBZ2 717 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 CYP4F12Q9HCS2 524 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 KCND1Q9NSA2 647 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 UCKL1Q9NWZ5 548 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 SLC17A4Q9Y2C5 497 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 PCDHGA1Q9Y5H4 931 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 PLXNB3Q9ULL4 1909 aa10.84□□□□□ -0.67
CHMP3-205ENST00000409810 KNTC1P50748 2209 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 FADS2P1A8MWK0 482 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 GPR89AB7ZAQ6 455 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 AP3B1O00203 1094 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 AURKAO14965 403 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 SIGLEC6O43699 453 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 USP12O75317 370 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 CEACAM5P06731 702 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 IVLP07476 585 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 GPR89BP0CG08 455 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 HADHAP40939 763 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 RPIAP49247 311 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 CDH17Q12864 832 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 ILF3Q12906 894 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHMP3-205ENST00000409810 ILKQ13418 452 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 C1orf61Q13536 156 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 SEMA5AQ13591 1074 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 LAMB3Q13751 1172 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 SPARCL1Q14515 664 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 DEFB133Q30KQ1 61 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-205ENST00000409810 PPP1R21Q6ZMI0 780 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 GALNT13Q8IUC8 556 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 PHYKPLQ8IUZ5 450 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 TAB3Q8N5C8 712 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-205ENST00000409810 PRELID2Q8N945 189 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 FAM181AQ8N9Y4 354 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 GPR26Q8NDV2 337 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 COG1Q8WTW3 980 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 MS4A14Q96JA4 679 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 VPS35Q96QK1 796 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 WDR24Q96S15 920 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 AGAP2Q99490 1192 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 C19orf43Q9BQ61 176 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 GSDMCQ9BYG8 508 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 TCEAL2Q9H3H9 227 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms