RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 BRSK1Q8TDC3 778 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 PDXPQ96GD0 296 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 CAPZA3Q96KX2 299 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 PLEKHG4BQ96PX9 1271 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 KLQ9UEF7 1012 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 ARL5AQ9Y689 179 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 DGKBQ9Y6T7 804 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 GAPDHSO14556 408 aaPredicted RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 GIPC1O14908 333 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 KCNK5O95279 499 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 TPH1P17752 444 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 KELP23276 732 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 GRK6P43250 576 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 FNTAP49354 379 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 HK3P52790 923 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 TRIP13Q15645 432 aaPredicted RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 LINC00523Q86TU6 105 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 TRAM1L1Q8N609 369 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 ZNF548Q8NEK5 533 aaPredicted RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 OR52K1Q8NGK4 314 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 PTCD2Q8WV60 388 aaKnown RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 LRRC45Q96CN5 670 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 HIC2Q96JB3 615 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 TBATAQ96M53 351 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 LRRC61Q9BV99 259 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 IL26Q9NPH9 171 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 MRPL40Q9NQ50 206 aaKnown RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 EIF2B3Q9NR50 452 aaKnown RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 PIH1D1Q9NWS0 290 aaKnown RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 APOBEC3BQ9UH17 382 aaKnown RBP22.23■■□□□ 1.15
PTCD3-203ENST00000409783 TMPRSS11EQ9UL52 423 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 SLC17A4Q9Y2C5 497 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 PLXNB3Q9ULL4 1909 aa22.23■■□□□ 1.15
PTCD3-203ENST00000409783 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 GOLGA6L10A0A0M3HER8 536 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 H3BM21 787 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 LDB2O43679 373 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 RASGRP1O95267 797 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 KRT14P02533 472 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 LPOP22079 712 aaPredicted RBP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 SYT10Q6XYQ8 523 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 TRIM74Q86UV6 250 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 HID1Q8IV36 788 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 DTX3LQ8TDB6 740 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 RHBDD1Q8TEB9 315 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 SETD7Q8WTS6 366 aaKnown RBP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 BTN2A2Q8WVV5 523 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 SCARF2Q96GP6 870 aaPredicted RBP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 ZSCAN5AQ9BUG6 496 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 SPATA16Q9BXB7 569 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 CLPBQ9H078 707 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 DDX47Q9H0S4 455 aaKnown RBP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 CASS4Q9NQ75 786 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 OAS3Q9Y6K5 1087 aaKnown RBP22.22■■□□□ 1.15
PTCD3-203ENST00000409783 CSNK1G3Q9Y6M4 447 aa22.22■■□□□ 1.15
PTCD3-203ENST00000409783 PRSS38A1L453 326 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 INPP4BO15327 924 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 PPFIA2O75334 1257 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 APRTP07741 180 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 CEACAM1P13688 526 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 POLD2P49005 469 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 ZNF140P52738 457 aaPredicted RBP22.21■■□□□ 1.15
PTCD3-203ENST00000409783 CDH17Q12864 832 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 PDPK2PQ6A1A2 396 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 EID2Q8N6I1 236 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 C19orf43Q9BQ61 176 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 SLC13A1Q9BZW2 595 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 SLC32A1Q9H598 525 aa22.21■■□□□ 1.15
PTCD3-203ENST00000409783 C2orf81A6NN90 581 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 E7EVH7 732 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 TRIM38O00635 465 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 SCAMP1O15126 338 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 STX7O15400 261 aaKnown RBP22.2■■□□□ 1.14
PTCD3-203ENST00000409783 AQP9O43315 295 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 CRTAMO95727 393 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 CELA2BP08218 269 aaPredicted RBP22.2■■□□□ 1.14
PTCD3-203ENST00000409783 CASQ1P31415 396 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 SPAM1P38567 509 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 MAGEA6P43360 314 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 BLKP51451 505 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 NOVA1P51513 510 aaKnown RBP22.2■■□□□ 1.14
PTCD3-203ENST00000409783 BASP1P80723 227 aaKnown RBP22.2■■□□□ 1.14
PTCD3-203ENST00000409783 C1orf61Q13536 156 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 PRRT3Q5FWE3 981 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 ZDHHC20Q5W0Z9 365 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 RD3Q7Z3Z2 195 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 OR4K2Q8NGD2 314 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 OR13C4Q8NGS5 318 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 LMX1AQ8TE12 382 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 SLCO2A1Q92959 643 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 CYP4F12Q9HCS2 524 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 SPASTQ9UBP0 616 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 RNF14Q9UBS8 474 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 PCYOX1Q9UHG3 505 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 TMEM98Q9Y2Y6 226 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 PKP3Q9Y446 797 aa22.2■■□□□ 1.14
PTCD3-203ENST00000409783 TCRBV7S3A2A0A539 114 aa22.19■■□□□ 1.14
PTCD3-203ENST00000409783 TNFP01375 233 aa22.19■■□□□ 1.14
PTCD3-203ENST00000409783 IVLP07476 585 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms