RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 NKX1-2Q9UD57 310 aaPredicted RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 NAALADL1Q9UQQ1 740 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 DRG1Q9Y295 367 aaKnown RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 CHST2Q9Y4C5 530 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 NCANO14594 1321 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 MUC6Q6W4X9 2439 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ZDBF2Q9HCK1 2354 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 DENND4AQ7Z401 1863 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 CASTOR2A6NHX0 329 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 F8W810 466 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 PI4K2BG5E9Z4 385 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 TEX28O15482 410 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 DCXO43602 365 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 TADA2AO75478 443 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 TSPAN9O75954 239 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 GLUD1P00367 558 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 TMEM225BP0DP42 221 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 EPCAMP16422 314 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 GAP43P17677 238 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 KLRC2P26717 231 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 BSGP35613 385 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 PBX1P40424 430 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 STAT6P42226 847 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 MTHFRP42898 656 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 PCP4P48539 62 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 LIG4P49917 911 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 CLCN4P51793 760 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 CEBPZQ03701 1054 aaKnown RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 EFEMP1Q12805 493 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 SEMA3BQ13214 749 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 STK38Q15208 465 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 TBCEQ15813 527 aaPredicted RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 USP41Q3LFD5 358 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 GLRA4Q5JXX5 417 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 MFSD4BQ5TF39 518 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 SP5Q6BEB4 398 aaPredicted RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 ATL3Q6DD88 541 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 ARMC6Q6NXE6 501 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 ALKAL1Q6UXT8 129 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 HAUS6Q7Z4H7 955 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 CPLX4Q7Z7G2 160 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 DTX2Q86UW9 622 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 LINC00301Q8NCQ3 95 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 KCNG4Q8TDN1 519 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 HDAC7Q8WUI4 952 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 ATG4AQ8WYN0 398 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 NPIPB3Q92617 1050 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 STAMQ92783 540 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 ATP2A3Q93084 1043 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 BICD1Q96G01 975 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 EPSTI1Q96J88 318 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 LENG8Q96PV6 779 aaPredicted RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 NR1H4Q96RI1 486 aaPredicted RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 TSPAN18Q96SJ8 248 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 FIZ1Q96SL8 496 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 TCHPQ9BT92 498 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 DEF6Q9H4E7 631 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 BRF2Q9HAW0 419 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 EIF2B3Q9NR50 452 aaKnown RBP6.37□□□□□ -1.39
LSM5-203ENST00000409782 ENTPD2Q9Y5L3 495 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 SNX8Q9Y5X2 465 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 LYVE1Q9Y5Y7 322 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 CITO14578 2027 aa6.37□□□□□ -1.39
LSM5-203ENST00000409782 PDCD11Q14690 1871 aaKnown RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 SMIM28A0A1B0GU29 152 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 FAM170AA1A519 330 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 FAM90A7PA6NKC0 464 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 AGAP14A8MT82 685 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 FAM90A22PA8MWA6 464 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 FAM90A12PA8MX19 464 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 FAM90A23PA8MXZ1 464 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 GOLGA6L6A8MZA4 724 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 F5H697 171 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 LEFTY2O00292 366 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 TRIM24O15164 1050 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 P4HA2O15460 535 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 CLDN3O15551 220 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 TRAPPC3O43617 180 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 ERN1O75460 977 aaKnown RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 B3GAT3O94766 335 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 LMNAP02545 664 aaKnown RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 CLTAP09496 248 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 PORP16435 677 aaPredicted RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 IL11P20809 199 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 DRD1P21728 446 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 FAM3BP58499 235 aaPredicted RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 RPL15P61313 204 aaKnown RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 HSD11B2P80365 405 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 GTF2BQ00403 316 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 ROR1Q01973 937 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 ALCAMQ13740 583 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 PSMD5Q16401 504 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 NFIL3Q16649 462 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 UPP1Q16831 310 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 PREPLQ4J6C6 727 aaPredicted RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 HS1BP3Q53T59 392 aa6.36□□□□□ -1.39
LSM5-203ENST00000409782 HERC4Q5GLZ8 1057 aaPredicted RBP6.36□□□□□ -1.39
LSM5-203ENST00000409782 TMEM31Q5JXX7 168 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms