RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CD27P26842 260 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 NUDT1P36639 197 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 MAGEA4P43358 317 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 SPINT3P49223 89 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 CCR5P51681 352 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 NAA30Q147X3 362 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 AGERQ15109 404 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 TMEM259Q4ZIN3 620 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 HSD11B1LQ7Z5J1 315 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 TMEM135Q86UB9 458 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 PALM2Q8IXS6 379 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 AGGF1Q8N302 714 aaeCLIP16.46■□□□□ 0.231e-7■■■■□ 23.7
TSPAN4-208ENST00000409531 ASB12Q8WXK4 309 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 SNX19Q92543 992 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 COQ10AQ96MF6 247 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 TTC25Q96NG3 672 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 PLEKHG4BQ96PX9 1271 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 RTKNQ9BST9 563 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 EDEM2Q9BV94 578 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 NLE1Q9NVX2 485 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 NFKBIL1Q9UBC1 381 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 APPL1Q9UKG1 709 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 RPS6KL1Q9Y6S9 549 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 TNRC6BQ9UPQ9 1833 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 A0A0U1RQS6 177 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 IGLON5A6NGN9 336 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ARHGAP33O14559 1287 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 CDX4O14627 284 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SPAG6O75602 509 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 KRT37O76014 449 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SYPP08247 313 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 GSTA2P09210 222 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 MYBL2P10244 700 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 PSMA3P25788 255 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 DCDC1P59894 354 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 PRAMEP78395 509 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ACVR1Q04771 509 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ANKRD20A4Q4UJ75 823 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SPANXN3Q5MJ09 141 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 HP1BP3Q5SSJ5 553 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 EMBQ6PCB8 327 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ZNF765Q7L2R6 523 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 TECPR1Q7Z6L1 1165 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ANKMY2Q8IV38 441 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ZNF669Q96BR6 464 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 EID2BQ96D98 161 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 NUS1Q96E22 293 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 DTD2Q96FN9 168 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 DNAJC1Q96KC8 554 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 C1QTNF2Q9BXJ5 285 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 TMEM9BQ9NQ34 198 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 TREX1Q9NSU2 369 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ZFR2Q9UPR6 939 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 KCTD3Q9Y597 815 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 C4orf47A7E2U8 309 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 H7C0S8 307 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 BUD23O43709 281 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ERLIN1O75477 346 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 RECQL5O94762 991 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 TSHRP16473 764 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 NMBRP28336 390 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SPAM1P38567 509 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ETV3P41162 512 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ATXN3P54252 364 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 FASTKD3Q14CZ7 662 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SETMARQ53H47 684 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SEL1L3Q68CR1 1132 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 KIAA0930Q6ICG6 404 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 Q6ZVL8 140 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 NLRP8Q86W28 1048 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 GSPT2Q8IYD1 628 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 OR13C4Q8NGS5 318 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 OR13J1Q8NGT2 312 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 GABPB2Q8TAK5 448 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 DTX3LQ8TDB6 740 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 MFSD3Q96ES6 412 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 CFAP36Q96G28 342 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ZNF778Q96MU6 729 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ORAI3Q9BRQ5 295 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 ZDHHC5Q9C0B5 715 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM83DQ9H4H8 585 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 BPIFA1Q9NP55 256 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM169AQ9Y6X4 670 aa16.45■□□□□ 0.22
TSPAN4-208ENST00000409531 LAMA1P25391 3075 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 CCDC78A2IDD5 438 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 TM4SF5O14894 197 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 LATO43561 262 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 PYGLP06737 847 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM153BP0C7A2 387 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 BPIP17213 487 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 AFF3P51826 1226 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 PPP2CBP62714 309 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 PPP2CAP67775 309 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 TMPRSS15P98073 1019 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 CRYMQ14894 314 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 BRD3Q15059 726 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 LONRF1Q17RB8 773 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms