RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SERPINA4P29622 427 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 PRDX6P30041 224 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 HLA-FP30511 346 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 PTGER3P43115 390 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 STK19P49842 368 aaPredicted RBP24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 COPAP53621 1224 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 OR4D1Q15615 310 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 SETMARQ53H47 684 aaPredicted RBP24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 ZNF678Q5SXM1 525 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 C7orf61Q8IZ16 206 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 STK40Q8N2I9 435 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 PHTF2Q8N3S3 785 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 NKAPQ8N5F7 415 aaKnown RBP24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 DNAJC5GQ8N7S2 189 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 LEMD2Q8NC56 503 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 OSBPL1AQ9BXW6 950 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 ZFYVE1Q9HBF4 777 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 SLC25A13Q9UJS0 675 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 MED16Q9Y2X0 877 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 COMMD10Q9Y6G5 202 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 TMEM233B4DJY2 109 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 NEDD8-MDP1E9PL57 170 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 H3BMM5 538 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 MAGEC1O60732 1142 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 HOXA9P31269 272 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 ATP6V0D1P61421 351 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 GALNT1Q10472 559 aaPredicted RBP24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 KLF10Q13118 480 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 RPS27LQ71UM5 84 aaKnown RBP24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 RIN3Q8TB24 985 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 ISG20Q96AZ6 181 aaKnown RBP24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 EID2BQ96D98 161 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 BBS2Q9BXC9 721 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 GSTO2Q9H4Y5 243 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 TRMT6Q9UJA5 497 aaKnown RBP24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 C1orf232A0A0U1RR37 186 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 SUPT7LO94864 414 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 HNRNPA1P09651 372 aaKnown RBP eCLIP24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 IRS1P35568 1242 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 HERVK_113P63132 956 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 SULT2A1Q06520 285 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 NAA25Q14CX7 972 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 SLC5A9Q2M3M2 681 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 FUT11Q495W5 492 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 CUZD1Q86UP6 607 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 KIRREL3Q8IZU9 778 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 STAG3L4Q8TBR4 150 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 KIAA1191Q96A73 305 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 ERVK-6Q9BXR3 956 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 RNF112Q9ULX5 631 aa24.54■■□□□ 1.52
DNMT3A-206ENST00000406659 SOBPA7XYQ1 873 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 CLASP2O75122 1294 aaKnown RBP24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 CD9P21926 228 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 HNF1BP35680 557 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 PPARGP37231 505 aaPredicted RBP24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 MYLK3Q32MK0 819 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 UNC50Q53HI1 259 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 CTSL3PQ5NE16 218 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 PTGR2Q8N8N7 351 aaPredicted RBP24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 IRF7Q92985 503 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 MTIF3Q9H2K0 278 aaKnown RBP24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 TBC1D14Q9P2M4 693 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 PLA2G4CQ9UP65 541 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 HS3ST2Q9Y278 367 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 FIS1Q9Y3D6 152 aa24.53■■□□□ 1.52
DNMT3A-206ENST00000406659 MEI4A8MW99 385 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 E5RI56 91 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 UBXN8O00124 270 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 KERAO60938 352 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 NIPSNAP2O75323 286 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 ESR1P03372 595 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 JUNP05412 331 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 COX4I1P13073 169 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 EZRP15311 586 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 CHRM3P20309 590 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 ADARP55265 1226 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 NTHL1P78549 312 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 ACCSLQ4AC99 568 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 ASTLQ6HA08 431 aaPredicted RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 C22orf39Q6P5X5 142 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 CERS6Q6ZMG9 384 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 ATOH8Q96SQ7 321 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 GALPQ9UBC7 116 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 G3BP2Q9UN86 482 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 BNIP3LO60238 219 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 CLDN7O95471 211 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 PABPC1P11940 636 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 GFAPP14136 432 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 SYN1P17600 705 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 RAP1GDS1P52306 607 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 PFKFB4Q16877 469 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 FAM151BQ6UXP7 276 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 SCUBE1Q8IWY4 988 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 ZNF557Q8N988 423 aaPredicted RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 SIDT2Q8NBJ9 832 aaKnown RBP24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 TUBGCP5Q96RT8 1024 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 TTC1Q99614 292 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 C19orf43Q9BQ61 176 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 THTPAQ9BU02 230 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 LINC00597Q9H2U6 94 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms