RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 CPSF7Q8N684 471 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 CYGBQ8WWM9 190 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ATP6V1E2Q96A05 226 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TAMM41Q96BW9 452 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TBC1D20Q96BZ9 403 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 CMTM5Q96DZ9 223 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 PLEKHA8Q96JA3 519 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 SENP8Q96LD8 212 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 SMIM14Q96QK8 99 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ALPK1Q96QP1 1244 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TMEM209Q96SK2 561 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 SENP6Q9GZR1 1112 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 LHX5Q9H2C1 402 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TP63Q9H3D4 680 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 POMKQ9H5K3 350 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 S100A14Q9HCY8 104 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ARMC1Q9NVT9 282 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 MYO10Q9HD67 2058 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 CLOCKO15516 846 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TRIM13O60858 407 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 LRIG2O94898 1065 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TFAP2AP05549 437 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 GSTM1P09488 218 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 PTPN1P18031 435 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 M6PRP20645 277 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 YWHAQP27348 245 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 HOXC13P31276 330 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 PTPN7P35236 360 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 CHN2P52757 468 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TPTEP56180 551 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 GPR85P60893 370 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 FOLH1Q04609 750 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 YWHAHQ04917 246 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 KLF10Q13118 480 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 PTK2BQ14289 1009 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 FAM83EQ2M2I3 478 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 OTUD3Q5T2D3 398 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 SLC27A1Q6PCB7 646 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 DRICH1Q6PGQ1 229 aaPredicted RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ANKRD33Q7Z3H0 272 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 GLRX5Q86SX6 157 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 CFAP52Q8N1V2 620 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ATP6V0D2Q8N8Y2 350 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 MZB1Q8WU39 189 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TNIP3Q96KP6 325 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TUBB6Q9BUF5 446 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 SLC4A5Q9BY07 1137 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ASB7Q9H672 318 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 AFF4Q9UHB7 1163 aaKnown RBP6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 ITGA11Q9UKX5 1188 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 TMEM5Q9Y2B1 443 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 KCTD3Q9Y597 815 aa6.53□□□□□ -1.36
CEACAM1-207ENST00000403444 REV3LO60673 3130 aa6.52□□□□□ -1.36
CEACAM1-207ENST00000403444 PRR23AA6NEV1 266 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 NT5C1B-RDH14C9J2C7 533 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 M0QZ92 97 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 YKT6O15498 198 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 SPAG6O75602 509 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 TIPRLO75663 272 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 MYO1DO94832 1006 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 SIX3O95343 332 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 PRSS56P0CW18 603 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 IRF1P10914 325 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 PGAM1P18669 254 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 CXCR2P25025 360 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 PIK3R1P27986 724 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 CCR1P32246 355 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 TSPAN7P41732 249 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 PIK3CGP48736 1102 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 SERPINB9P50453 376 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 HK2P52789 917 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 PHC1P78364 1004 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 POU6F2P78424 691 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ECT2LQ008S8 904 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 CHRNEQ04844 493 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 EFEMP1Q12805 493 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 CSTF3Q12996 717 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 PDK3Q15120 406 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 NPTX1Q15818 432 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 DDR2Q16832 855 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ANKRD20A4Q4UJ75 823 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ZNF789Q5FWF6 425 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 FSCBQ5H9T9 825 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 RBM20Q5T481 1227 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ELMSAN1Q6PJG2 1045 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 BNC2Q6ZN30 1099 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ZNF534Q76KX8 674 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 MILR1Q7Z6M3 343 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ERI1Q8IV48 349 aaKnown RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 CLIP4Q8N3C7 705 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 FRS2Q8WU20 508 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 BORCS5Q969J3 196 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 LRRC40Q9H9A6 602 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 NCKIPSDQ9NZQ3 722 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 ZDHHC2Q9UIJ5 367 aa6.52□□□□□ -1.37
CEACAM1-207ENST00000403444 EMCNQ9ULC0 261 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms