RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 AGKQ53H12 422 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 FNBP1LQ5T0N5 605 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 C11orf63Q6NUN7 778 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 PRSS55Q6UWB4 352 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 TMPRSS11BQ86T26 416 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 FAM13CQ8NE31 585 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZSWIM1Q9BR11 485 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZSCAN5AQ9BUG6 496 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 GMIPQ9P107 970 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 IFT52Q9Y366 437 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 FOXN3O00409 490 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RXRGP48443 463 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 NTRK3Q16288 839 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 PLEKHG6Q3KR16 790 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 OGFRL1Q5TC84 451 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RIT1Q92963 219 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 CATSPER2Q96P56 530 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 PTPN18Q99952 460 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 DCUN1D5Q9BTE7 237 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 KBTBD4Q9NVX7 518 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 LIMD1Q9UGP4 676 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 EVLQ9UI08 416 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF225Q9UK10 706 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 VPS4AQ9UN37 437 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ASMTP46597 345 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PLK1P53350 603 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 MAXP61244 160 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 TAF10Q12962 218 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ASB12Q8WXK4 309 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 HEBP2Q9Y5Z4 205 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 DUSP11O75319 330 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 TRUB2O95900 331 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF8P17098 575 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CXCR3P49682 368 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 STXBP5Q5T5C0 1151 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 OAFQ86UD1 273 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ZSCAN4Q8NAM6 433 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 C7orf57Q8NEG2 295 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC22A8Q8TCC7 542 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 AP2M1Q96CW1 435 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 A0A0X1KG70 313 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 TCRBV21S2A2A0A5A6 115 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC35G6P0C7Q6 338 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 HOXB2P14652 356 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 MANFP55145 182 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ACTR3P61158 418 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ELF3P78545 371 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ROR2Q01974 943 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CBX3Q13185 183 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 NUP54Q7Z3B4 507 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 RDH11Q8TC12 318 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 TAS1R2Q8TE23 839 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 MAGEB18Q96M61 343 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SEMA3CQ99985 751 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF717Q9BY31 904 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 B3GAT2Q9NPZ5 323 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 LOC100506127A0A0U1RQW1 187 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 EFCAB10A6NFE3 127 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 NARSO43776 548 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 UBXN11Q5T124 520 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ALG1LQ6GMV1 187 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC8B1Q6J4K2 584 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 COMTD1Q86VU5 262 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 EEF1AKMT1Q8WVE0 214 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ERCC6L2Q5T890 1561 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 DDX3XO00571 662 aaKnown RBP eCLIP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PPM1BO75688 479 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SYNGR4O95473 234 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 HNF1BP35680 557 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 MAPK7Q13164 816 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 RTL4Q6ZR62 310 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ZZZ3Q8IYH5 903 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 HTR3CQ8WXA8 447 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 FAM117AQ9C073 453 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 GRIP2Q9C0E4 1043 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 LACRTQ9GZZ8 138 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CARS2Q9HA77 564 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 GLS2Q9UI32 602 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CDC14AQ9UNH5 594 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PNMA8CA0A1B0GUJ8 204 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 MDFIC2A0A1B0GVS7 189 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 UGT1A1P22309 533 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CRABP2P29373 138 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF846Q147U1 533 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 TMEM63BQ5T3F8 832 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms