RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 VPS18Q9P253 973 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 RABGEF1Q9UJ41 708 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 LHX6Q9UPM6 363 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 SCN8AQ9UQD0 1980 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 EFR3BQ9Y2G0 817 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 PCDHA3Q9Y5H8 950 aa14.79□□□□□ -0.04
SMIM11A-203ENST00000399299 UNC13CQ8NB66 2214 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 B4DGG1 531 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 D6RAR5 112 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 APOC4-APOC2K7ER74 178 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 NDST3O95803 873 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 APOC2P02655 101 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 CDC25BP30305 580 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 PTPN7P35236 360 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 ADCY8P40145 1251 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 EIF2S3P41091 472 aaKnown RBP14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 POLD2P49005 469 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 PDX1P52945 283 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 DCDC1P59894 354 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 CTBSQ01459 385 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 XRCC4Q13426 336 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 LRP8Q14114 963 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 LLGL1Q15334 1064 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 DOK6Q6PKX4 331 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 B4GALNT4Q76KP1 1039 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 LYSMD3Q7Z3D4 306 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 SPATA22Q8NHS9 363 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 ATXN7L3BQ96GX2 97 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 ZNF578Q96N58 590 aaPredicted RBP14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 OR2M4Q96R27 311 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 GFM1Q96RP9 751 aaKnown RBP14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 FAM83DQ9H4H8 585 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 RAD18Q9NS91 495 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 SPATS2LQ9NUQ6 558 aaKnown RBP14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 TAAR2Q9P1P5 351 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 IMPACTQ9P2X3 320 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 FAM153AQ9UHL3 310 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 PCDHGA8Q9Y5G5 932 aa14.78□□□□□ -0.04
SMIM11A-203ENST00000399299 KIF26BQ2KJY2 2108 aa14.77□□□□□ -0.04
SMIM11A-203ENST00000399299 A0A1W2PQM1 296 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CCDC66A2RUB6 948 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 TMX2-CTNND1H3BSU7 103 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 MT-CYBP00156 380 aaPredicted RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 MPOP05164 745 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 FGF1P05230 155 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CTNNA2P26232 953 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 AK4P27144 223 aaPredicted RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CD68P34810 354 aaPredicted RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 MLLT3P42568 568 aaPredicted RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ERVPABLB-1P60509 514 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CCL7P80098 99 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 NOMO1Q15155 1222 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 PCSK7Q16549 785 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 PYCR3Q53H96 274 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 FAM182AQ5T1J6 154 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CCDC70Q6NSX1 233 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ZNF438Q7Z4V0 828 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 TMC3Q7Z5M5 1100 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 SPRED1Q7Z699 444 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 TRIM74Q86UV6 250 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ZC3H18Q86VM9 953 aaKnown RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CCNJLQ8IV13 435 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 TMEM139Q8IV31 216 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 TXLNBQ8N3L3 684 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 LRRC57Q8N9N7 239 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ACRBPQ8NEB7 543 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ZDHHC1Q8WTX9 485 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 HTR3CQ8WXA8 447 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 EID2BQ96D98 161 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 LIN37Q96GY3 246 aaPredicted RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 BAG1Q99933 345 aaPredicted RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 LACRTQ9GZZ8 138 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 LRRN3Q9H3W5 708 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ASCL3Q9NQ33 180 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 LRIT1Q9P2V4 623 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CNOT6Q9ULM6 557 aaKnown RBP14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 TMEM98Q9Y2Y6 226 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ZNF711Q9Y462 761 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 ST14Q9Y5Y6 855 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 RNF215Q9Y6U7 377 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 DUSP10Q9Y6W6 482 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 PTPRQQ9UMZ3 2332 aa14.77□□□□□ -0.05
SMIM11A-203ENST00000399299 CCDC187A0A096LP49 1063 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 LOC285095A0A1B0GVY8 99 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 A0A1W2PNU3 283 aaPredicted RBP14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 FADS2P1A8MWK0 482 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 CASC3O15234 703 aaKnown RBP14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 INPP4BO15327 924 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 RRP8O43159 456 aaKnown RBP14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 PMPCBO75439 489 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 EPOP01588 193 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 RPLP0P05388 317 aaKnown RBP14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 NFKB1P19838 968 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 CCKBRP32239 447 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 ABCG1P45844 678 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 NAP1L1P55209 391 aaKnown RBP14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 EIF3IQ13347 325 aaKnown RBP14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 NR1D2Q14995 579 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 COL28A1Q2UY09 1125 aa14.76□□□□□ -0.05
SMIM11A-203ENST00000399299 C3orf38Q5JPI3 329 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms