RNA–Protein interactions for RNA: ENST00000399003.1

AP002358.1-201, humanhuman

TSL 2 BASIC

Gene AP002358.1, Length 2,805 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002358.1-201ENST00000399003 USP33Q8TEY7 942 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 C19orf60Q96EN9 201 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ALPK1Q96QP1 1244 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 MFSD1Q9H3U5 465 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 TNFRSF12AQ9NP84 129 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ACSS2Q9NR19 701 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 TMEM30AQ9NV96 361 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 UBP1Q9NZI7 540 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SLC2A6Q9UGQ3 507 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SNX13Q9Y5W8 968 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 HAS3O00219 553 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SOCS2O14508 198 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 IRAK2O43187 625 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 HLA-DQB2P05538 268 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 CHRNB1P11230 501 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 HNRNPLP14866 589 aaKnown RBP eCLIP8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SAT1P21673 171 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 HOXC8P31273 242 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 STX1BP61266 288 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 HERVK_113P63132 956 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 IFITM2Q01629 132 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 GNA12Q03113 381 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ACVR1Q04771 509 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 RALGDSQ12967 914 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 NFATC3Q12968 1075 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 PMS2P3Q13401 168 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 RBM20Q5T481 1227 aaKnown RBP8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 FAAH2Q6GMR7 532 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 USP43Q70EL4 1123 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 CILP2Q8IUL8 1156 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 EPHX4Q8IUS5 362 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 PHYKPLQ8IUZ5 450 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SULF1Q8IWU6 871 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ELMOD1Q8N336 334 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 TMEM40Q8WWA1 233 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 TADA1Q96BN2 335 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ERLEC1Q96DZ1 483 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SENP8Q96LD8 212 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ZNF347Q96SE7 839 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 C9orf16Q9BUW7 83 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ERVK-6Q9BXR3 956 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 SLC25A51Q9H1U9 297 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ABHD16BQ9H3Z7 469 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 MOV10Q9HCE1 1003 aaKnown RBP8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 KLK14Q9P0G3 267 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ZNF639Q9UID6 485 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 ATP11BQ9Y2G3 1177 aa8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 GOLGB1Q14789 3259 aaKnown RBP8.45□□□□□ -1.06
AP002358.1-201ENST00000399003 C1orf232A0A0U1RR37 186 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 MROH6A6NGR9 719 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 ADM5C9JUS6 153 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 UBFD1O14562 309 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 VPS4BO75351 444 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 GPC4O75487 556 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 RASAL1O95294 804 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 MT-CYBP00156 380 aaPredicted RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 TCN1P20061 433 aaPredicted RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 PCSK1P29120 753 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 SLC7A2P52569 658 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CSHL1Q14406 222 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 PPP1R3AQ16821 1122 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 HECTD2Q5U5R9 776 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 KANK2Q63ZY3 851 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 FAM171BQ6P995 826 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 GALNT18Q6P9A2 607 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CLYBLQ8N0X4 340 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 MYO1HQ8N1T3 1032 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 FAM47BQ8NA70 645 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 PDZD8Q8NEN9 1154 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 PNPT1Q8TCS8 783 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 SEPT8Q92599 483 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 DCPSQ96C86 337 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CELF6Q96J87 481 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CIB1Q99828 191 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 TUBA1CQ9BQE3 449 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 TRIM54Q9BYV2 358 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 FAM49AQ9H0Q0 323 aaPredicted RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 SEMA6AQ9H2E6 1030 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 SMOC2Q9H3U7 446 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 NOL11Q9H8H0 719 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 SLC52A3Q9NQ40 469 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CCDC167Q9P0B6 97 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 N6AMT1Q9Y5N5 214 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CHD5Q8TDI0 1954 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 DHRS12A0PJE2 317 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 NEMP2A6NFY4 417 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 ZNF839A8K0R7 811 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 TTC34A8MYJ7 566 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 FXYD1O00168 92 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 PLOD2O00469 737 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 NME4O00746 187 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CLPXO76031 633 aa8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 ENO2P09104 434 aaPredicted RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 ALDOCP09972 364 aaKnown RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 ZNF182P17025 639 aaPredicted RBP8.44□□□□□ -1.06
AP002358.1-201ENST00000399003 CCNA2P20248 432 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms