RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 KCTD14Q9BQ13 255 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 FSD1LQ9BXM9 530 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 DNAI2Q9GZS0 605 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NANOGQ9H9S0 305 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 EML4Q9HC35 981 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PDGFCQ9NRA1 345 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 AGPAT4Q9NRZ5 378 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PRMT7Q9NVM4 692 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PNMA8BQ9ULN7 279 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 BRCA1P38398 1863 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 IGKV6D-21A0A0A0MT36 114 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 I6L893 689 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 KPNA4O00629 521 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PIP5K1BO14986 540 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SNAP91O60641 907 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SULT1C4O75897 302 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 INHBBP09529 407 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ZNF354CQ86Y25 554 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NIM1KQ8IY84 436 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ADGRG5Q8IZF4 528 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TRPV3Q8NET8 790 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ESAMQ96AP7 390 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NRBF2Q96F24 287 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CDK15Q96Q40 435 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 INSM2Q96T92 566 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CHID1Q9BWS9 393 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SEZ6LQ9BYH1 1024 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TRIM15Q9C019 465 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ASB7Q9H672 318 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NOL6Q9H6R4 1146 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SMURF2Q9HAU4 748 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ITM2CQ9NQX7 267 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 GIN1Q9NXP7 522 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CDH7Q9ULB5 785 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 FNDC3AQ9Y2H6 1198 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TIMM13Q9Y5L4 95 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 KIAA1217Q5T5P2 1943 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM155AB1AL88 458 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ACOX3O15254 700 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 MYO1DO94832 1006 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NOS2P35228 1153 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ADRA1BP35368 520 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NPY2RP49146 381 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CCT8P50990 548 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PRKAA2P54646 552 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 LIPEQ05469 1076 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 KCNJ8Q15842 424 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PFKFB4Q16877 469 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TMTC4Q5T4D3 741 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 NAPEPLDQ6IQ20 393 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PDZD4Q76G19 769 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SLCO6A1Q86UG4 719 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 SFRP1Q8N474 314 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 GPR152Q8TDT2 470 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ZFP90Q8TF47 636 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CAPSLQ8WWF8 208 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 ELMO1Q92556 727 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CENPIQ92674 756 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 MAELQ96JY0 434 aaKnown RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM167AQ96KS9 214 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TEPSINQ96N21 525 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 GPR20Q99678 358 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 TUBA8Q9NY65 449 aaPredicted RBP9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 GNPTGQ9UJJ9 305 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 PSME2Q9UL46 239 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 CPQQ9Y646 472 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 U3KQV3 271 aa9.86□□□□□ -0.83
PTCHD4-202ENST00000398738 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 AQP9O43315 295 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TPD52L2O43399 206 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 AGXTP21549 392 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TCEA1P23193 301 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC6A2P23975 617 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 HPCAL1P37235 193 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 GSK3BP49841 420 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 SEPHS1P49903 392 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PLA2G16P53816 162 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PPIL2Q13356 520 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 SF3B4Q15427 424 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TIGD2Q4W5G0 525 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 CCNYL2Q5T2Q4 361 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TMEM236Q5W0B7 351 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 NEPROQ6NW34 567 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PKN3Q6P5Z2 889 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ABI1Q8IZP0 508 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ZNF420Q8TAQ5 688 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 GBA3Q9H227 469 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PLEKHA5Q9HAU0 1116 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ARMC1Q9NVT9 282 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ANAPC2Q9UJX6 822 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PTBP2Q9UKA9 531 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PCDHGB7Q9Y5F8 929 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 AP3B1O00203 1094 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PSMD11O00231 422 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 AXIN1O15169 862 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 NPHS1O60500 1241 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 INMTO95050 263 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ZNF286BP0CG31 522 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 GFAPP14136 432 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms