RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 ADGRG6Q86SQ4 1221 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 DCP2Q8IU60 420 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 BBOF1Q8ND07 529 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 MNS1Q8NEH6 495 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 WRAP53Q9BUR4 548 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 F5H423 210 aaPredicted RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 H0Y8X5 98 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 RPS3P23396 243 aaKnown RBP eCLIP10.53□□□□□ -0.72
NUP98-205ENST00000397007 GCAP28676 217 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 NFATC2Q13469 925 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 PIANPQ8IYJ0 282 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 AENQ8WTP8 325 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 BTN2A2Q8WVV5 523 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 DNAJC1Q96KC8 554 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 BIRC8Q96P09 236 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 APOL2Q9BQE5 337 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 RAB17Q9H0T7 212 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 SMYD2Q9NRG4 433 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 BCCIPQ9P287 314 aaKnown RBP eCLIP10.53□□□□□ -0.72
NUP98-205ENST00000397007 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 IFNB1P01574 187 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 GABRB3P28472 473 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 MRPS25P82663 173 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 ITKQ08881 620 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 NFATC4Q14934 902 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 ATP13A5Q4VNC0 1218 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 ZC3H14Q6PJT7 736 aaKnown RBP10.53□□□□□ -0.72
NUP98-205ENST00000397007 GLT6D1Q7Z4J2 308 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 CXorf40AQ8TE69 158 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 ISL2Q96A47 359 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 FSD1LQ9BXM9 530 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 EPB41L5Q9HCM4 733 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 INVSQ9Y283 1065 aa10.53□□□□□ -0.72
NUP98-205ENST00000397007 A6NNZ2 444 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 BANF1O75531 89 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 SRP72O76094 671 aaKnown RBP10.52□□□□□ -0.72
NUP98-205ENST00000397007 GSTA2P09210 222 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 PIRTP0C851 137 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 PGAM1P18669 254 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 ACRV1P26436 265 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 SPAM1P38567 509 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 TUBB4BP68371 445 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 SLC7A5Q01650 507 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 CUL1Q13616 776 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 LRRC14Q15048 493 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 CSRP2Q16527 193 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 ANKRD20A4Q4UJ75 823 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 OR13H1Q8NG92 308 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 PCOLCE2Q9UKZ9 415 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 SNX24Q9Y343 169 aa10.52□□□□□ -0.72
NUP98-205ENST00000397007 CUL9Q8IWT3 2517 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 A0A1B0GTW7 788 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 SDR42E2A6NKP2 422 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 FAM159BA6NKW6 160 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 STK25O00506 426 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CRTAMO95727 393 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CSF2P04141 144 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 NME1P15531 152 aaKnown RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 RABIFP47224 123 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 LAMB3Q13751 1172 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 SIM2Q14190 667 aaPredicted RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 NR1D2Q14995 579 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 UNC5AQ6ZN44 842 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 PIP4P1Q86T03 277 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 RYBPQ8N488 228 aaPredicted RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 CEP76Q8TAP6 659 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 SCAMP4Q969E2 229 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 DYRK4Q9NR20 520 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 FAM114A2Q9NRY5 505 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 GPR39O43194 453 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CBFA2T3O75081 653 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 TPH1P17752 444 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CARSP49589 748 aaKnown RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 CDKN1CP49918 316 aaPredicted RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 CRYMQ14894 314 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 GPR33Q49SQ1 333 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 PSAPL1Q6NUJ1 521 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 C8orf74Q6P047 294 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 SNX20Q7Z614 316 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 FAM124AQ86V42 546 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CACUL1Q86Y37 369 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CCNJLQ8IV13 435 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 SLC25A41Q8N5S1 370 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 C2CD4AQ8NCU7 369 aaPredicted RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 OR4K2Q8NGD2 314 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 MFSD3Q96ES6 412 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 RIOK2Q9BVS4 552 aaKnown RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 PIH1D1Q9NWS0 290 aaKnown RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 PKD2L2Q9NZM6 624 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 MARCH4Q9P2E8 410 aaPredicted RBP10.52□□□□□ -0.73
NUP98-205ENST00000397007 FKBPLQ9UIM3 349 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 CDYLQ9Y232 598 aa10.52□□□□□ -0.73
NUP98-205ENST00000397007 OTOGLQ3ZCN5 2332 aa10.51□□□□□ -0.73
NUP98-205ENST00000397007 CCDC162PA2VCL2 907 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms