RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ATOH8Q96SQ7 321 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 GPR21Q99679 349 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 IL17CQ9P0M4 197 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 TRMT6Q9UJA5 497 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 FNDC3AQ9Y2H6 1198 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 MED16Q9Y2X0 877 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 FIS1Q9Y3D6 152 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 COMMD10Q9Y6G5 202 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 UBXN8O00124 270 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 SUPT7LO94864 414 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 FGF19O95750 216 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 THRAP10827 490 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 GNAZP19086 355 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 ITGAXP20702 1163 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CD9P21926 228 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CD70P32970 193 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CLCN4P51793 760 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CACNG1Q06432 222 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 PTPRRQ15256 657 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 RCN1Q15293 331 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 UNC50Q53HI1 259 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 PLPP4Q5VZY2 271 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 RPS27LQ71UM5 84 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 CAMK1DQ8IU85 385 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 STK40Q8N2I9 435 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 NKAPQ8N5F7 415 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 PAF1Q8N7H5 531 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CEP70Q8NHQ1 597 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 SLC22A17Q8WUG5 538 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 PIH1D2Q8WWB5 315 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 KIAA1191Q96A73 305 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 BIRC8Q96P09 236 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 ASB2Q96Q27 587 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 SLC46A2Q9BY10 475 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 MEAF6Q9HAF1 191 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 ABCB8Q9NUT2 735 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 MRGBPQ9NV56 204 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 SLC7A8Q9UHI5 535 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 RNF112Q9ULX5 631 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 SLC30A1Q9Y6M5 507 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 LOC100653049A0A140TA62 436 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 SUPT3HB4E1H0 165 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 HTRA2O43464 458 aaPredicted RBP14.88□□□□□ -0.03
CBX3-202ENST00000396386 SUPT3HO75486 399 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 KRT34O76011 436 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 KRT36O76013 467 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 CSPG5O95196 566 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 ALPIP09923 528 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 GFAPP14136 432 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 CTNNB1P35222 781 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 HMGCLP35914 325 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 PTGER3P43115 390 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 INHBCP55103 352 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 XIAPP98170 497 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 ACCSLQ4AC99 568 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 SETMARQ53H47 684 aaPredicted RBP14.88□□□□□ -0.03
CBX3-202ENST00000396386 CTSL3PQ5NE16 218 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 TMEM198Q66K66 360 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 RIPOR1Q6ZS17 1223 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 TAS2R42Q7RTR8 314 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 SNX32Q86XE0 403 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 STAG3L4Q8TBR4 150 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 ACTRT2Q8TDY3 377 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 LENG8Q96PV6 779 aaPredicted RBP14.88□□□□□ -0.03
CBX3-202ENST00000396386 SMG9Q9H0W8 520 aaKnown RBP14.88□□□□□ -0.03
CBX3-202ENST00000396386 ATP13A3Q9H7F0 1226 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 CLEC4EQ9ULY5 219 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 G3BP2Q9UN86 482 aaKnown RBP14.88□□□□□ -0.03
CBX3-202ENST00000396386 LZTS1Q9Y250 596 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 IRAK3Q9Y616 596 aa14.88□□□□□ -0.03
CBX3-202ENST00000396386 ALPK3Q96L96 1907 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 A0A088AWK7 358 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 CXorf51AA0A1B0GTR3 108 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 NIPSNAP2O75323 286 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 ESR1P03372 595 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 DDX6P26196 483 aaKnown RBP eCLIP14.87□□□□□ -0.03
CBX3-202ENST00000396386 ADARP55265 1226 aaKnown RBP14.87□□□□□ -0.03
CBX3-202ENST00000396386 CCDC6Q16204 474 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 PITRM1Q5JRX3 1037 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 C1orf146Q5VVC0 180 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 RP9Q8TA86 221 aaKnown RBP14.87□□□□□ -0.03
CBX3-202ENST00000396386 SHKBP1Q8TBC3 707 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
CBX3-202ENST00000396386 KCNV2Q8TDN2 545 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 KCNJ9Q92806 393 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 MARK4Q96L34 752 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 PANX3Q96QZ0 392 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 C19orf43Q9BQ61 176 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 TACO1Q9BSH4 297 aaKnown RBP14.87□□□□□ -0.03
CBX3-202ENST00000396386 TNFRSF12AQ9NP84 129 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 HCFC1R1Q9NWW0 138 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 TRAF6Q9Y4K3 522 aa14.87□□□□□ -0.03
CBX3-202ENST00000396386 COPG1Q9Y678 874 aaKnown RBP14.87□□□□□ -0.03
CBX3-202ENST00000396386 A0A0J9YYE9 177 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CCDC189A1A4V9 331 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 RGSL1A5PLK6 1076 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 NPEPPSL1A6NEC2 478 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CAPN8A6NHC0 703 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 SYCE1LA8MT33 242 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms