RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TCAF2A6NFQ2 919 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 STX16-NPEPL1H3BU86 382 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 STX16O14662 325 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 TGFB1I1O43294 461 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LCA5LO95447 670 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NFATC1O95644 943 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CORO1AP31146 461 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CDK9P50750 372 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 DSELQ8IZU8 1212 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 COPS5Q92905 334 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LPPQ93052 612 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MCRS1Q96EZ8 462 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 INPP4AQ96PE3 977 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MRPL45Q9BRJ2 306 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ING3Q9NXR8 418 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PSMA1P25786 263 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 GNPDA1P46926 289 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PRR5P85299 388 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 DDR1Q08345 913 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 HSDL1Q3SXM5 330 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 TRABD2AQ86V40 505 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 GPR156Q8NFN8 814 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SLC44A1Q8WWI5 657 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CLIP3Q96DZ5 547 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 KLRG1Q96E93 195 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PCDH18Q9HCL0 1135 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CLDN4O14493 209 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 UROSP10746 265 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ACADLP28330 430 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 OMPP47874 163 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CDH4P55283 916 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 WNT3AP56704 352 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SPESP1Q6UW49 350 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ARHGAP22Q7Z5H3 698 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PARGQ86W56 976 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CFAP52Q8N1V2 620 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MIR1-1HGQ9H1L0 117 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 IFT80Q9P2H3 777 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PSMD13Q9UNM6 376 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 E9PAM4 449 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LIN7AO14910 233 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CILPO75339 1184 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ERAL1O75616 437 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SEC24AO95486 1093 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 RPIAP49247 311 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 RAB25P57735 213 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 C9orf64Q5T6V5 341 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LLGL2Q6P1M3 1020 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 GPR135Q8IZ08 494 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SLC4A11Q8NBS3 891 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LEMD2Q8NC56 503 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 TRPV3Q8NET8 790 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 AP2M1Q96CW1 435 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 HAVCR1Q96D42 359 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 EXOC2Q96KP1 924 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PRICKLE1Q96MT3 831 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CSPG4P5Q96PW8 444 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PDCD10Q9BUL8 212 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PHPT1Q9NRX4 125 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CLIC5Q9NZA1 410 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 DEC1Q9P2X7 70 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 N6AMT1Q9Y5N5 214 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ATP6AP2A0A1C7CYW4 349 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 A0A1W2PQH9 124 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 H3BNX3 289 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ATP6AP2O75787 350 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 C22orf31O95567 290 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PRNPP04156 253 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SPAM1P38567 509 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SLC26A3P40879 764 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 RPL5P46777 297 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MYBPC1Q00872 1141 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PTP4A2Q12974 167 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NOMO1Q15155 1222 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 POM121L1PQ3SYA9 428 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PTF1AQ7RTS3 328 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 RFKQ969G6 155 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 COQ7Q99807 217 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 TMEM138Q9NPI0 162 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ING4Q9UNL4 249 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CHKBQ9Y259 395 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SQORQ9Y6N5 450 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3DA0A087WVF3 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3IA0A087WXS9 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3EA0A087X179 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3KA0A087X1G2 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 GLYATL1P3A0A0U1RQE8 302 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3FA6NER0 549 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3LB9A6J9 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ZBTB22O15209 634 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 LYNP07948 512 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3HP0C7X1 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 BMP6P22004 513 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PBX3P40426 434 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 POLR2JP52435 117 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CCL23P55773 120 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CYP4F2P78329 520 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CACNG1Q06432 222 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CYP4F3Q08477 520 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms