RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RRP15Q9Y3B9 282 aaKnown RBP19.24■□□□□ 0.67
LMNB1-202ENST00000395354 STON1Q9Y6Q2 735 aa19.24■□□□□ 0.67
LMNB1-202ENST00000395354 H7C0S8 307 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 H2AFYO75367 372 aaKnown RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 CHRM1P11229 460 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 IL12RB1P42701 662 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 WASP42768 502 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 EPHB1P54762 984 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TAS2R39P59534 338 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 IRF9Q00978 393 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 OCRLQ01968 901 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 BST1Q10588 318 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TYSND1Q2T9J0 566 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 RNF187Q5TA31 235 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 SDE2Q6IQ49 451 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TTC30BQ8N4P2 665 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 IL17RCQ8NAC3 791 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PPP1R14CQ8TAE6 165 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 FRS2Q8WU20 508 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PDCD6IPQ8WUM4 868 aaKnown RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 OSBPL6Q9BZF3 934 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TM6SF2Q9BZW4 377 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TMEM245Q9H330 911 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 ATP13A3Q9H7F0 1226 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 THAP1Q9NVV9 213 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 MARCH4Q9P2E8 410 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PCDHB9Q9Y5E1 797 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TECTAO75443 2155 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 A0A0C4DFX4 3053 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TRAFD1O14545 582 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF821O75541 412 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 KLHL2O95198 593 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 KLF8O95600 359 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 SERPINE1P05121 402 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 HLA-EP13747 358 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 SLC26A3P40879 764 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PRKAA2P54646 552 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 CCDC15Q0P6D6 951 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 ENPP2Q13822 863 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 FAM45BPQ6NSW5 357 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 TRMT11Q7Z4G4 463 aaKnown RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 CEP97Q8IW35 865 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PLPP6Q8IY26 295 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PCDH20Q8N6Y1 951 aaKnown RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF366Q8N895 744 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 FLCNQ8NFG4 579 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 OR4K2Q8NGD2 314 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 RPLP0P6Q8NHW5 317 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 FAM45AQ8TCE6 357 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 C10orf82Q8WW14 230 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 PIH1D2Q8WWB5 315 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 SUDS3Q9H7L9 328 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 EVLQ9UI08 416 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-202ENST00000395354 VPS9D1Q9Y2B5 631 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 VWA7Q9Y334 891 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 SIT1Q9Y3P8 196 aa19.23■□□□□ 0.67
LMNB1-202ENST00000395354 OR51F1A6NGY5 319 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 CCL22O00626 93 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 AURKAO14965 403 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 PHGDHO43175 533 aaKnown RBP19.22■□□□□ 0.67
LMNB1-202ENST00000395354 BUD23O43709 281 aaKnown RBP19.22■□□□□ 0.67
LMNB1-202ENST00000395354 FGF3P11487 239 aaPredicted RBP19.22■□□□□ 0.67
LMNB1-202ENST00000395354 SAT1P21673 171 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 NTSR1P30989 418 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 SLC8A1P32418 973 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 ABL2P42684 1182 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 STC1P52823 247 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 CORO7P57737 925 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 IRX4P78413 519 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 HNRNPA1L2Q32P51 320 aaKnown RBP19.22■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF789Q5FWF6 425 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 HECTD2Q5U5R9 776 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 C22orf39Q6P5X5 142 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 TXNDC5Q8NBS9 432 aaKnown RBP19.22■□□□□ 0.67
LMNB1-202ENST00000395354 PJA1Q8NG27 643 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 OR6Y1Q8NGX8 325 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 TNKS2Q9H2K2 1166 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 MTG2Q9H4K7 406 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF358Q9NW07 568 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 SUN2Q9UH99 717 aa19.22■□□□□ 0.67
LMNB1-202ENST00000395354 RUVBL2Q9Y230 463 aaKnown RBP19.22■□□□□ 0.67
LMNB1-202ENST00000395354 PFDN6O15212 129 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 STX7O15400 261 aaKnown RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 BNIP3LO60238 219 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 DCTN3O75935 186 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 PDGFBP01127 241 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 EPHX1P07099 455 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 SERPINA4P29622 427 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 SF3A3Q12874 501 aaKnown RBP eCLIP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 PTPRCAPQ14761 206 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 HSF5Q4G112 596 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 Q6ZS52 159 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 TBC1D1Q86TI0 1168 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 CAMK1DQ8IU85 385 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 CRLF3Q8IUI8 442 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 C10orf107Q8IVU9 208 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 CENPLQ8N0S6 344 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 CPEB1Q9BZB8 566 aaKnown RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 ACTR5Q9H9F9 607 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-202ENST00000395354 POPDC3Q9HBV1 291 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms