RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 ZNF460Q14592 562 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 MLF2Q15773 248 aaPredicted RBP24.44■■□□□ 1.5
CTF1-202ENST00000395019 PREPLQ4J6C6 727 aaPredicted RBP24.44■■□□□ 1.5
CTF1-202ENST00000395019 FNDC3BQ53EP0 1204 aaKnown RBP24.44■■□□□ 1.5
CTF1-202ENST00000395019 ZRANB3Q5FWF4 1079 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 PSAPL1Q6NUJ1 521 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 ZNF549Q6P9A3 640 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 TSPAN33Q86UF1 283 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 RALGPS2Q86X27 583 aaPredicted RBP24.44■■□□□ 1.5
CTF1-202ENST00000395019 NUDCD3Q8IVD9 361 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 PIANPQ8IYJ0 282 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 RAB3IL1Q8TBN0 382 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 UCMAQ8WVF2 138 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 LPGAT1Q92604 370 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 PITPNM3Q9BZ71 974 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 C8orf33Q9H7E9 229 aaPredicted RBP24.44■■□□□ 1.5
CTF1-202ENST00000395019 SLC30A1Q9Y6M5 507 aa24.44■■□□□ 1.5
CTF1-202ENST00000395019 TBC1D3BA6NDS4 549 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 EDF1O60869 148 aaKnown RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 APOA4P06727 396 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 BGNP21810 368 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 CDKN1CP49918 316 aaPredicted RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 IRX4P78413 519 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 HNRNPA1L2Q32P51 320 aaKnown RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 FAM47EQ6ZV65 393 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 CENPLQ8N0S6 344 aaPredicted RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 ZNF366Q8N895 744 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 GRAMD1AQ96CP6 724 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 P2RY13Q9BPV8 354 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 AARSD1Q9BTE6 412 aaKnown RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 MECRQ9BV79 373 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 NMRAL1Q9HBL8 299 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 APPL1Q9UKG1 709 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 EDDM13A0A1B0GTR0 161 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 KAT7O95251 611 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 WISP3O95389 354 aaPredicted RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 BPIP17213 487 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 FDXRP22570 491 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 ZNF234Q14588 700 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 TSNAXIP1Q2TAA8 658 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 ZNF805Q5CZA5 627 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 LRRC66Q68CR7 880 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 KCTD4Q8WVF5 259 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.43■■□□□ 1.5
CTF1-202ENST00000395019 SEC16BQ96JE7 1060 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 ELAC2Q9BQ52 826 aaKnown RBP24.43■■□□□ 1.5
CTF1-202ENST00000395019 TMEM245Q9H330 911 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 FAM96AQ9H5X1 160 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 SLCO1B3Q9NPD5 702 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 ZDHHC4Q9NPG8 344 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 ARHGEF3Q9NR81 526 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 B4GALT6Q9UBX8 382 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 HCN2Q9UL51 889 aa24.43■■□□□ 1.5
CTF1-202ENST00000395019 GAPDHSO14556 408 aaPredicted RBP24.42■■□□□ 1.5
CTF1-202ENST00000395019 SRP72O76094 671 aaKnown RBP24.42■■□□□ 1.5
CTF1-202ENST00000395019 KLHL2O95198 593 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 LHCGRP22888 699 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 NFKBIAP25963 317 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 SPAM1P38567 509 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 GRIA2P42262 883 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 SUOXP51687 545 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 CDKN2DP55273 166 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 FOXR1Q6PIV2 292 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 IL26Q9NPH9 171 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 COPG2Q9UBF2 871 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 MID2Q9UJV3 735 aa24.42■■□□□ 1.5
CTF1-202ENST00000395019 RUVBL2Q9Y230 463 aaKnown RBP24.42■■□□□ 1.5
CTF1-202ENST00000395019 FNDC3AQ9Y2H6 1198 aaKnown RBP24.42■■□□□ 1.5
CTF1-202ENST00000395019 A8MX80 341 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 UPK3BL1B0FP48 263 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 UPK3BL2E5RIL1 263 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 SNX3O60493 162 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 EGFP01133 1207 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 CYP2A6P11509 494 aaPredicted RBP24.41■■□□□ 1.5
CTF1-202ENST00000395019 TIMP2P16035 220 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 ALDH3A1P30838 453 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 PTSQ03393 145 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 PCLAFQ15004 111 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 C9orf64Q5T6V5 341 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 ATG16L1Q676U5 607 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 CERS6Q6ZMG9 384 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 SNX20Q7Z614 316 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 TBC1D1Q86TI0 1168 aaPredicted RBP24.41■■□□□ 1.5
CTF1-202ENST00000395019 UBALD2Q8IYN6 164 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 SIX5Q8N196 739 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 GPR78Q96P69 363 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 POPDC3Q9HBV1 291 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 THAP10Q9P2Z0 257 aaPredicted RBP24.41■■□□□ 1.5
CTF1-202ENST00000395019 WNT16Q9UBV4 365 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 FBXL21Q9UKT6 434 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 STARD13Q9Y3M8 1113 aa24.41■■□□□ 1.5
CTF1-202ENST00000395019 SCN8AQ9UQD0 1980 aa24.4■■□□□ 1.5
CTF1-202ENST00000395019 UBA6A0AVT1 1052 aaPredicted RBP24.4■■□□□ 1.5
CTF1-202ENST00000395019 PRAMEF1O95521 474 aa24.4■■□□□ 1.5
CTF1-202ENST00000395019 IL1BP01584 269 aa24.4■■□□□ 1.5
CTF1-202ENST00000395019 PRNPP04156 253 aa24.4■■□□□ 1.5
CTF1-202ENST00000395019 GLULP15104 373 aa24.4■■□□□ 1.5
CTF1-202ENST00000395019 SLC26A3P40879 764 aa24.4■■□□□ 1.5
CTF1-202ENST00000395019 ADARP55265 1226 aaKnown RBP24.4■■□□□ 1.5
CTF1-202ENST00000395019 ZXDAP98168 799 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms