RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 SMURF2Q9HAU4 748 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 LRRC4Q9HBW1 653 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 SPON1Q9HCB6 807 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 AASDHPPTQ9NRN7 309 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 FBXL12Q9NXK8 326 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 GGA3Q9NZ52 723 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 KCNN3Q9UGI6 736 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 ARIH1Q9Y4X5 557 aaPredicted RBP7.16□□□□□ -1.26
NPHP1-203ENST00000393272 PCDHA9Q9Y5H5 950 aa7.16□□□□□ -1.26
NPHP1-203ENST00000393272 MN1Q10571 1320 aaPredicted RBP7.16□□□□□ -1.26
NPHP1-203ENST00000393272 AGAP5A6NIR3 686 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 SPATA31C2B4DYI2 1134 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 B8ZZF3 427 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 MFSD11O43934 449 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 HUS1O60921 280 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 MYCLP12524 364 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ALOX12P18054 663 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ACVR2AP27037 513 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PSMB9P28065 219 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 RRM2P31350 389 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 SFNP31947 248 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 HTR2BP41595 481 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 NR2C2P49116 596 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PLK1P53350 603 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 OR2B6P58173 313 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 SP4Q02446 784 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PTPN11Q06124 597 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PSMD5Q16401 504 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 DUSP7Q16829 419 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 VARS2Q5ST30 1063 aaKnown RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ZNF544Q6NX49 715 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 LARP4Q71RC2 724 aaKnown RBP eCLIP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PRSS48Q7RTY5 328 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ZBTB33Q86T24 672 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PLD3Q8IV08 490 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 CEP97Q8IW35 865 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 SYTL1Q8IYJ3 562 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 FLAD1Q8NFF5 587 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 OR5H6Q8NGV6 325 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 GRPEL2Q8TAA5 225 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TMEM125Q96AQ2 219 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 RMDN1Q96DB5 314 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ST6GAL2Q96JF0 529 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 CSPG4P5Q96PW8 444 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 C6orf62Q9GZU0 229 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PIF1Q9H611 641 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 FAM49BQ9NUQ9 324 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 OPTCQ9UBM4 332 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 OSGIN1Q9UJX0 560 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 INTS6Q9UL03 887 aaKnown RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PABPN1LA6NDY0 278 aaKnown RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 CCDC154A6NI56 674 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 H0YCG3 227 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 hCG_2039718K7EN88 272 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 POLRMTO00411 1230 aaKnown RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TBC1D4O60343 1298 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 NOBOXO60393 691 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PIGRP01833 764 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TSPAN8P19075 237 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 M6PRP20645 277 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 IMPDH1P20839 514 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 SDC4P31431 198 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 GGT5P36269 586 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 OR3A3P47888 321 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 RGS7P49802 495 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 LIPEQ05469 1076 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 KCNAB2Q13303 367 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 DUOXA2Q1HG44 320 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 MTERF2Q49AM1 385 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 CERCAMQ5T4B2 595 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TTC23Q5W5X9 447 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PRR23CQ6ZRP0 262 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 BEND5Q7L4P6 421 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 SLC51BQ86UW2 128 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 OSTM1Q86WC4 334 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 AMIGO3Q86WK7 504 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 HS3ST5Q8IZT8 346 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ZNF567Q8N184 647 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 FAM109AQ8N4B1 249 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 DNAAF3Q8N9W5 541 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 CNIH3Q8TBE1 160 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 MCOLN3Q8TDD5 553 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 BPIFB1Q8TDL5 484 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ELMO1Q92556 727 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 LGALS12Q96DT0 336 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TMEM74Q96NL1 305 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 TBCBQ99426 244 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ELOVL4Q9GZR5 314 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 MKRN2Q9H000 416 aaKnown RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 FAM49AQ9H0Q0 323 aaPredicted RBP7.15□□□□□ -1.26
NPHP1-203ENST00000393272 DPP3Q9NY33 737 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 ACOT9Q9Y305 439 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 NDUFAF1Q9Y375 327 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 PTGDR2Q9Y5Y4 395 aa7.15□□□□□ -1.26
NPHP1-203ENST00000393272 POLR1CO15160 346 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms