RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 CLEC18CQ8NCF0 446 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 C1orf131Q8NDD1 294 aaKnown RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 OR2AK2Q8NG84 335 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 OR8K5Q8NH50 307 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 TANKQ92844 425 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 ADGRG7Q96K78 797 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 MEIS3Q99687 375 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SEPT5Q99719 369 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 GHITMQ9H3K2 345 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 PLK3Q9H4B4 646 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 C6orf106Q9H6K1 298 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SETD4Q9NVD3 440 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF224Q9NZL3 707 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 OGFRQ9NZT2 677 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 COPG2Q9UBF2 871 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 SIX4Q9UIU6 781 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 GPR34Q9UPC5 381 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 CLIC4Q9Y696 253 aa4.39□□□□□ -1.71
SNORA40.2-201ENST00000390847 GOLGA6L9A6NEM1 432 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 M0QZ24 198 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 HS3ST1O14792 307 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 SLC28A2O43868 658 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 RFPL2O75678 378 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZBTB11O95625 1053 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 AFPP02771 609 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 SRPRAP08240 638 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 ALOX12P18054 663 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 TKTP29401 623 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 CCKARP32238 428 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 HOXD13P35453 343 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 GARSP41250 739 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 ART1P52961 327 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 NLRP5P59047 1200 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 CREB5Q02930 508 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 TNFAIP1Q13829 316 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 PDE1CQ14123 709 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 MEA1Q16626 185 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 ASTE1Q2TB18 679 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 SETMARQ53H47 684 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF805Q5CZA5 627 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 RILPL1Q5EBL4 403 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 DCST1Q5T197 706 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 LRCH2Q5VUJ6 765 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 SPATA1Q5VX52 437 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 FRG2Q64ET8 278 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 KIAA0930Q6ICG6 404 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 BEST3Q8N1M1 668 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 C17orf53Q8N3J3 647 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 C9orf106Q8NAJ2 232 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 OR1J2Q8NGS2 313 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 LILRB1Q8NHL6 650 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 HMGCLL1Q8TB92 370 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 MAGEC3Q8TD91 643 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 MOAP1Q96BY2 351 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 FAM120BQ96EK7 910 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 PGAM5Q96HS1 289 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 MTERF1Q99551 399 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 IL25Q9H293 177 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 WDR26Q9H7D7 661 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 LTB4R2Q9NPC1 389 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 SMARCAL1Q9NZC9 954 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 C1RLQ9NZP8 487 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 SELENONQ9NZV5 590 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 STK39Q9UEW8 545 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 ADD3Q9UEY8 706 aaKnown RBP4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 FBXL17Q9UF56 701 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 FBXW11Q9UKB1 542 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 KCNS2Q9ULS6 477 aa4.38□□□□□ -1.71
SNORA40.2-201ENST00000390847 KANSL1LA0AUZ9 987 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 PLSCR5A0PG75 271 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 EIF4E1BA6NMX2 242 aaKnown RBP4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 DAB1O75553 588 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 TSPAN9O75954 239 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 TPPPO94811 219 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 KCNK5O95279 499 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 OR2C1O95371 312 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 PMS2P2O95744 297 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 HIST1H2ABP04908 130 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 ACTN1P12814 892 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 DAOP14920 347 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 GABRB1P18505 474 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 ANXA7P20073 488 aaKnown RBP4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 HIST1H2ADP20671 130 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 PSMB10P40306 273 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 TMPOP42166 694 aaKnown RBP4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 SNX16P57768 344 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 TAS2R38P59533 333 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 KRTAP10-11P60412 298 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 PDE1BQ01064 536 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 KIF5AQ12840 1032 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 ZNF155Q12901 538 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 DLG1Q12959 904 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 CHAF1BQ13112 559 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 PRKG2Q13237 762 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 SNTA1Q13424 505 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 CUL4AQ13619 759 aa4.37□□□□□ -1.71
SNORA40.2-201ENST00000390847 KEAP1Q14145 624 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms