RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PNPT1Q8TCS8 783 aaKnown RBP14.22□□□□□ -0.13
RTF1-201ENST00000389629 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 GIMAP2Q9UG22 337 aa14.22□□□□□ -0.13
RTF1-201ENST00000389629 NPHS1O60500 1241 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 UGT2B4P06133 528 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 SERPINF2P08697 491 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 S100A3P33764 101 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 INHBCP55103 352 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 SNAPC2Q13487 334 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 FAM91A1Q658Y4 838 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 FIBCD1Q8N539 461 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 BHMTQ93088 406 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 ROPN1LQ96C74 230 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 KLHL5Q96PQ7 755 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 TRPV5Q9NQA5 729 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 SPASTQ9UBP0 616 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 SAMHD1Q9Y3Z3 626 aaKnown RBP14.21□□□□□ -0.13
RTF1-201ENST00000389629 PPEF2O14830 753 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 VILLO15195 856 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 WBP4O75554 376 aaKnown RBP14.21□□□□□ -0.13
RTF1-201ENST00000389629 ELK4P28324 431 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 ZNF57Q68EA5 555 aaPredicted RBP14.21□□□□□ -0.13
RTF1-201ENST00000389629 CCDC149Q6ZUS6 474 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 KBTBD8Q8NFY9 601 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 ZNF512Q96ME7 567 aaPredicted RBP14.21□□□□□ -0.13
RTF1-201ENST00000389629 SLC29A1Q99808 456 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 EHD1Q9H4M9 534 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 ITM2CQ9NQX7 267 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.21□□□□□ -0.135e-7■■■□□ 16.2
RTF1-201ENST00000389629 IKZF3Q9UKT9 509 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 PRG3Q9Y2Y8 225 aaPredicted RBP14.21□□□□□ -0.13
RTF1-201ENST00000389629 RAMP2O60895 175 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 LRIG2O94898 1065 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 NTRK1P04629 796 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 HOXD12P35452 270 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 PHC1P78364 1004 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 PIGFQ07326 219 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 SYPL2Q5VXT5 272 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 CNSTQ6PJW8 725 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 SLC7A5P1Q8MH63 180 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 KATNAL1Q9BW62 490 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 TOR3AQ9H497 397 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 CATSPERZQ9NTU4 200 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 CNTN3Q9P232 1028 aa14.21□□□□□ -0.13
RTF1-201ENST00000389629 CCDC182A6NF36 153 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 POMCP01189 267 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 PCSK6P29122 969 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 SLC1A2P43004 574 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 CCT3P49368 545 aaKnown RBP14.21□□□□□ -0.14
RTF1-201ENST00000389629 ACADVLP49748 655 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 POLR2JP52435 117 aaKnown RBP14.21□□□□□ -0.14
RTF1-201ENST00000389629 ZNF135P52742 658 aaPredicted RBP14.21□□□□□ -0.14
RTF1-201ENST00000389629 MTPNP58546 118 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.14
RTF1-201ENST00000389629 VGLL4Q14135 290 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 TAB1Q15750 504 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 PPP1R3AQ16821 1122 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 NAPRTQ6XQN6 538 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 CAMKK1Q8N5S9 505 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 BIRC8Q96P09 236 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 FCRL3Q96P31 734 aaPredicted RBP14.21□□□□□ -0.14
RTF1-201ENST00000389629 GAD1Q99259 594 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 SACM1LQ9NTJ5 587 aa14.21□□□□□ -0.14
RTF1-201ENST00000389629 DOCK2Q92608 1830 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 ZNF197O14709 1029 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 TSPAN9O75954 239 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 AHSGP02765 367 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 MED22Q15528 200 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 INO80DQ53TQ3 878 aaPredicted RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 SLC15A4Q8N697 577 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 CLHC1Q8NHS4 586 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 ESAMQ96AP7 390 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 CEPT1Q9Y6K0 416 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 ANKRD36CQ5JPF3 1778 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 PIPSLA2A3N6 862 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 NOTOA8MTQ0 251 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 CD3EAPO15446 510 aaKnown RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 RGS10O43665 173 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 TSPAN1O60635 241 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 TMCC2O75069 709 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 RGS20O76081 388 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SNAP29O95721 258 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 NKX2-5P52952 324 aaPredicted RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 ILF2Q12905 390 aaKnown RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 SYT16Q17RD7 645 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 PRR23BQ6ZRT6 265 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 ZC3HC1Q86WB0 502 aaKnown RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 UBE2J2Q8N2K1 259 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 HEPHQ9BQS7 1158 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 RNF38Q9H0F5 515 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 HDHD2Q9H0R4 259 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 MIR1-1HGQ9H1L0 117 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 GPBP1L1Q9HC44 474 aaPredicted RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 C8orf4Q9NR00 106 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SFMBT1Q9UHJ3 866 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SPATA2Q9UM82 520 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 KRT87PA6NCN2 255 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 AQP12BA6NM10 295 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms