RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CASP14P31944 242 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 GPR1P46091 355 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 MTIF2P46199 727 aaKnown RBP17.2■□□□□ 0.34
HMGN1-203ENST00000380748 NDST2P52849 883 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 SH3BP2P78314 561 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 NSUN2Q08J23 767 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGN1-203ENST00000380748 DNASE1L3Q13609 305 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 ARHGAP36Q6ZRI8 547 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 LYSMD3Q7Z3D4 306 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 PDCD6IPQ8WUM4 868 aaKnown RBP17.2■□□□□ 0.34
HMGN1-203ENST00000380748 ELMO2Q96JJ3 720 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 TBC1D10AQ9BXI6 508 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 ZNF768Q9H5H4 540 aaKnown RBP17.2■□□□□ 0.34
HMGN1-203ENST00000380748 KCTD5Q9NXV2 234 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 TBC1D29Q9UFV1 150 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 FZD10Q9ULW2 581 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 PCDHGC4Q9Y5F7 938 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 PCDHGA6Q9Y5G7 932 aa17.2■□□□□ 0.34
HMGN1-203ENST00000380748 A0A0U1RQS6 177 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 NPIPB15A6NHN6 443 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-203ENST00000380748 ARHGAP42A6NI28 874 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 CCP110O43303 1012 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 HTRA2O43464 458 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-203ENST00000380748 NDUFA10O95299 355 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 CPP00450 1065 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-203ENST00000380748 KRT3P12035 628 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 GPD1P21695 349 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 EPHA4P54764 986 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 AP1S1P61966 158 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 LRP8Q14114 963 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 WDR59Q6PJI9 974 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 TSPAN33Q86UF1 283 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 GALNT13Q8IUC8 556 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 RASGRP3Q8IV61 690 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 CT55Q8WUE5 264 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 OR6C1Q96RD1 312 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 SLC25A23Q9BV35 468 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 CD84Q9UIB8 345 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 LNPEPQ9UIQ6 1025 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 NOCTQ9UK39 431 aaKnown RBP17.19■□□□□ 0.34
HMGN1-203ENST00000380748 PRKAB1Q9Y478 270 aa17.19■□□□□ 0.34
HMGN1-203ENST00000380748 A6NCN8 305 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 TPI1P60174 286 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 DPTQ07507 201 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 PTP4A2Q12974 167 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 KLHDC7AQ5VTJ3 777 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 IYDQ6PHW0 289 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 ADAMTSL4Q6UY14 1074 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 TECPR1Q7Z6L1 1165 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 Q8NA96 180 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 SH3KBP1Q96B97 665 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 C9orf72Q96LT7 481 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 RUFY1Q96T51 708 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
HMGN1-203ENST00000380748 ACTL8Q9H568 366 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 STN1Q9H668 368 aaKnown RBP17.18■□□□□ 0.34
HMGN1-203ENST00000380748 SP110Q9HB58 689 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 MLXIPLQ9NP71 852 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 MAP10Q9P2G4 905 aa17.18■□□□□ 0.34
HMGN1-203ENST00000380748 F8P00451 2351 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 CELSR1Q9NYQ6 3014 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 F8VZ95 297 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 PSMD11O00231 422 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 RECKO95980 971 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 CHRNB2P17787 502 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 GARSP41250 739 aaKnown RBP17.17■□□□□ 0.34
HMGN1-203ENST00000380748 SEPHS1P49903 392 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 FMO1Q01740 532 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 SLC9B2Q86UD5 537 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 PLXDC1Q8IUK5 500 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 ARHGAP12Q8IWW6 846 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 ADGRG4Q8IZF6 3080 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 SCAMP4Q969E2 229 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 SELENOOQ9BVL4 669 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 SLC29A3Q9BZD2 475 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 ABCG8Q9H221 673 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 GPATCH2LQ9NWQ4 482 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 OGFRQ9NZT2 677 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 CNOT8Q9UFF9 292 aaKnown RBP17.17■□□□□ 0.34
HMGN1-203ENST00000380748 KCNK6Q9Y257 313 aa17.17■□□□□ 0.34
HMGN1-203ENST00000380748 PCDHGA9Q9Y5G4 932 aaKnown RBP17.17■□□□□ 0.34
HMGN1-203ENST00000380748 SETD2Q9BYW2 2564 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 DFFAO00273 331 aa17.16■□□□□ 0.34
HMGN1-203ENST00000380748 C9P02748 559 aa17.16■□□□□ 0.34
HMGN1-203ENST00000380748 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
HMGN1-203ENST00000380748 CYP2A6P11509 494 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 CCL11P51671 97 aa17.16■□□□□ 0.34
HMGN1-203ENST00000380748 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 TRAF2Q12933 501 aa17.16■□□□□ 0.34
HMGN1-203ENST00000380748 RFTN1Q14699 578 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 MAN2A1Q16706 1144 aa17.16■□□□□ 0.34
HMGN1-203ENST00000380748 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 JMJD6Q6NYC1 403 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 CHST15Q7LFX5 561 aaPredicted RBP17.16■□□□□ 0.34
HMGN1-203ENST00000380748 AP2M1Q96CW1 435 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms