RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CCDC189A1A4V9 331 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 BUD23O43709 281 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 SLC4A1P02730 911 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 NAA20P61599 178 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 MRPS35P82673 323 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 TIAL1Q01085 375 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 IRGCQ6NXR0 463 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 SLC26A7Q8TE54 656 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 PTERQ96BW5 349 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 CCDC124Q96CT7 223 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 CCDC68Q9H2F9 335 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 CXorf56Q9H5V9 222 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 TAS2R13Q9NYV9 303 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 TRAF6Q9Y4K3 522 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 XIRP2A4UGR9 3374 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 SPTBN5Q9NRC6 3674 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 BAG2O95816 211 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 PRLP01236 227 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 PIRTP0C851 137 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 PLK1P53350 603 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 ART3Q13508 389 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 PTPRCAPQ14761 206 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 TCEAL5Q5H9L2 206 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 PPM1LQ5SGD2 360 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 DHDDSQ86SQ9 333 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 MUC3BQ9H195 1237 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 NSUN3Q9H649 340 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 GKN1Q9NS71 199 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 UTP6Q9NYH9 597 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 G3BP2Q9UN86 482 aaKnown RBP21.47■■□□□ 1.03
TRIM54-202ENST00000380075 SPO11Q9Y5K1 396 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 ACTL7AQ9Y615 435 aa21.47■■□□□ 1.03
TRIM54-202ENST00000380075 CBX4O00257 560 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 SUPT7LO94864 414 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 F11P03951 625 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 CD9P21926 228 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 LPOP22079 712 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-202ENST00000380075 CDC25CP30307 473 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 NRIP1P48552 1158 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 SGSHP51688 502 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 ATP6V0D1P61421 351 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 KLC1Q07866 573 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 INO80DQ53TQ3 878 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-202ENST00000380075 RNF219Q5W0B1 726 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-202ENST00000380075 CXorf57Q6NSI4 855 aaKnown RBP21.46■■□□□ 1.03
TRIM54-202ENST00000380075 OR4K2Q8NGD2 314 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 LPGAT1Q92604 370 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 FAM136AQ96C01 138 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 RCN3Q96D15 328 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 DERL2Q9GZP9 239 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 POLR3BQ9NW08 1133 aaPredicted RBP21.46■■□□□ 1.03
TRIM54-202ENST00000380075 HACD3Q9P035 362 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 RAI2Q9Y5P3 530 aa21.46■■□□□ 1.03
TRIM54-202ENST00000380075 PRRC2BQ5JSZ5 2229 aaKnown RBP21.46■■□□□ 1.03
TRIM54-202ENST00000380075 NDUFS3O75489 264 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 SKAP2O75563 359 aaPredicted RBP21.45■■□□□ 1.02
TRIM54-202ENST00000380075 ABL2P42684 1182 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 ATP4BP51164 291 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 CREMQ03060 361 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 PLD1Q13393 1074 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 UNC50Q53HI1 259 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 ANO7Q6IWH7 933 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 PNPLA1Q8N8W4 532 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 RNF38Q9H0F5 515 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 MAFFQ9ULX9 164 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 UBDO15205 165 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 CLASP2O75122 1294 aaKnown RBP21.45■■□□□ 1.02
TRIM54-202ENST00000380075 RHOBTB1O94844 696 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 FOSL2P15408 326 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 KCNC1P48547 511 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 STX5Q13190 355 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 RAB33AQ14088 237 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 KBTBD6Q86V97 674 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 CLYBLQ8N0X4 340 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 MDGA1Q8NFP4 955 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 SHKBP1Q8TBC3 707 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 STAG3L4Q8TBR4 150 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 KIAA1191Q96A73 305 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 IGFLR1Q9H665 355 aa21.45■■□□□ 1.02
TRIM54-202ENST00000380075 MRPL40Q9NQ50 206 aaKnown RBP21.45■■□□□ 1.02
TRIM54-202ENST00000380075 TYW5A2RUC4 315 aaKnown RBP21.44■■□□□ 1.02
TRIM54-202ENST00000380075 KERAO60938 352 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 C1RP00736 705 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 PYGLP06737 847 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 ADH1AP07327 375 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 FGF4P08620 206 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 TTPAP49638 278 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 XIAPP98170 497 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 GSTA3Q16772 222 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 PIGGQ5H8A4 983 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 TCHHL1Q5QJ38 904 aaPredicted RBP21.44■■□□□ 1.02
TRIM54-202ENST00000380075 LPCAT1Q8NF37 534 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 PYDC1Q8WXC3 89 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 NSMCE3Q96MG7 304 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 ATOH8Q96SQ7 321 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 MRPL1Q9BYD6 325 aaKnown RBP21.44■■□□□ 1.02
TRIM54-202ENST00000380075 WDR41Q9HAD4 459 aa21.44■■□□□ 1.02
TRIM54-202ENST00000380075 UBA6A0AVT1 1052 aaPredicted RBP21.43■■□□□ 1.02
TRIM54-202ENST00000380075 ANKRD66B4E2M5 251 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms