RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TTC39BQ5VTQ0 682 aaPredicted RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 LETMD1Q6P1Q0 360 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PRSS42Q7Z5A4 293 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZBTB8OSQ8IWT0 167 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 BBS7Q8IWZ6 715 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SVOPQ8N4V2 548 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SLC7A14Q8TBB6 771 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 DYNC2LI1Q8TCX1 351 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 DUS3LQ96G46 650 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 MSANTD3Q96H12 275 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF578Q96N58 590 aaPredicted RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF518BQ9C0D4 1074 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 MRPL40Q9NQ50 206 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SNX15Q9NRS6 342 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 MORF4L1Q9UBU8 362 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 BAG5Q9UL15 447 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM5Q9Y2B1 443 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 DOCK5Q9H7D0 1870 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 NRCAMQ92823 1304 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CNTNAP2Q9UHC6 1331 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 IGKV6-21A0A0C4DH24 114 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SAGE2PA6NJ88 616 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CAPN5O15484 640 aaPredicted RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 HBP1O60381 514 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 AVILO75366 819 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 NDUFS6O75380 124 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ADORA2AP29274 412 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CAPGP40121 348 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 MRPL28Q13084 256 aaKnown RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PLEKHG6Q3KR16 790 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PARP15Q460N3 678 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FBXO43Q4G163 708 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 WDR44Q5JSH3 913 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FAM102BQ5T8I3 360 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 USP51Q70EK9 711 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF767PQ75MW2 155 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PAGE2Q7Z2X7 111 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CDH26Q8IXH8 852 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FAM71DQ8N9W8 422 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FNDC5Q8NAU1 212 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 OR52H1Q8NGJ2 320 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 OR13J1Q8NGT2 312 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SPATA18Q8TC71 538 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 NXNL1Q96CM4 212 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 CDADC1Q9BWV3 514 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 FAM96AQ9H5X1 160 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ZFP14Q9HCL3 533 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 RANGRFQ9HD47 186 aaPredicted RBP7.47□□□□□ -1.21
CDKL5-201ENST00000379989 BRD7Q9NPI1 651 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 GPRC5BQ9NZH0 403 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 EMC3Q9P0I2 261 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 ANAPC7Q9UJX3 599 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 TMPRSS11EQ9UL52 423 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 SMCHD1A6NHR9 2005 aa7.47□□□□□ -1.21
CDKL5-201ENST00000379989 PRSS44E7EML9 344 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 CLIC2O15247 247 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 PAPSS1O43252 624 aaPredicted RBP7.46□□□□□ -1.21
CDKL5-201ENST00000379989 GABARAPO95166 117 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 AMHP03971 560 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 KELP23276 732 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 RUNX1T1Q06455 604 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 BMPR2Q13873 1038 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 COLEC12Q5KU26 742 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 CACHD1Q5VU97 1274 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 CYP2R1Q6VVX0 501 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 CATSPER4Q7RTX7 472 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 PIGZQ86VD9 579 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 CCDC36Q8IYA8 594 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 MICU2Q8IYU8 434 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 KIAA1958Q8N8K9 716 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 C2orf69Q8N8R5 385 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 RP9Q8TA86 221 aaKnown RBP7.46□□□□□ -1.21
CDKL5-201ENST00000379989 ZFAND1Q8TCF1 268 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 MAPK15Q8TD08 544 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 RPRD1AQ96P16 312 aaPredicted RBP7.46□□□□□ -1.21
CDKL5-201ENST00000379989 BDH2Q9BUT1 245 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 SLIRPQ9GZT3 109 aaKnown RBP7.46□□□□□ -1.21
CDKL5-201ENST00000379989 B3GNT2Q9NY97 397 aa7.46□□□□□ -1.21
CDKL5-201ENST00000379989 MAGED2Q9UNF1 606 aaPredicted RBP7.46□□□□□ -1.21
CDKL5-201ENST00000379989 TCRBV7S3A2A0A539 114 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 PSTPIP1O43586 416 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 PIGNO95427 931 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SGPL1O95470 568 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SNAP29O95721 258 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 C1QAP02745 245 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 JUNP05412 331 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 HTR1AP08908 422 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 MTHFD1P11586 935 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ITGA2P17301 1181 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 LRPAP1P30533 357 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 MAPK4P31152 587 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 LIG4P49917 911 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SCNN1GP51170 649 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 CYP2J2P51589 502 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 LSM3P62310 102 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 UBXN2AP68543 259 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 TEKQ02763 1124 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 DPY19L1Q2PZI1 675 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ALFQ53S48 1182 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms