RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 ALDH4A1P30038 563 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 ST3GAL4Q11206 333 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 OR2L8Q8NGY9 312 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 IMP3Q9NV31 184 aaKnown RBP11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 SETD4Q9NVD3 440 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 CXCR3P49682 368 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 GALK1P51570 392 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 C9orf64Q5T6V5 341 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 PIM1P11309 404 aaPredicted RBP11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 CLCN7P51798 805 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 SP140Q13342 867 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 EFR3AQ14156 821 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 ZBTB6Q15916 424 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 ARHGAP36Q6ZRI8 547 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 KXD1Q9BQD3 176 aa11.21□□□□□ -0.62
PTCHD1-201ENST00000379361 FPGTO14772 594 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 TSPAN1O60635 241 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ABRAQ8N0Z2 381 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CADM2Q8N3J6 435 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF433Q8N7K0 673 aaPredicted RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 C12orf50Q8NA57 414 aaPredicted RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 NSMCE3Q96MG7 304 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PHB2Q99623 299 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 TRAPPC6AO75865 159 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CFIP05156 583 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 FBXO30Q8TB52 745 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 SCGB3A2Q96PL1 93 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 RTKNQ9BST9 563 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 NELFAQ9H3P2 528 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ERAL1O75616 437 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CST1P01037 141 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PGAM2P15259 253 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 HCAR3P49019 387 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ADARP55265 1226 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 GTF2IRD2BQ6EKJ0 949 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 GTF2IRD2Q86UP8 949 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ZCCHC17Q9NP64 241 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 BAIAP2Q9UQB8 552 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 SMCHD1A6NHR9 2005 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ZNF726A6NNF4 738 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 NFATC1O95644 943 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 HSD11B1P28845 292 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 OR3A3P47888 321 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 OR3A2P47893 321 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ST3GAL1Q11201 340 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 BNIP2Q12982 314 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 NEPROQ6NW34 567 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PNPLA2Q96AD5 504 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CHADO15335 359 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 MT-CO1P00395 513 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 FOXM1Q08050 763 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CCNYL2Q5T2Q4 361 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 TMEM17Q86X19 198 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 RGL2O15211 777 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ARCN1P48444 511 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ATP6V0D1P61421 351 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 MRPS6P82932 125 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CEP41Q9BYV8 373 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ABCB10Q9NRK6 738 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CHD5Q8TDI0 1954 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ATXN2Q99700 1313 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 NEDD8-MDP1E9PL57 170 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PRMT5O14744 637 aaPredicted RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 RENP00797 406 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PMM1Q92871 262 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CASKO14936 926 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 UGT2B11O75310 529 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 LAPTM5Q13571 262 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 DUPD1Q68J44 220 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 ALG1LQ6GMV1 187 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CRTAC1Q9NQ79 661 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 DDX18Q9NVP1 670 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CLUHO75153 1309 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 B3GALT2O43825 422 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PCCBP05166 539 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 SCTRP47872 440 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 OR14C36Q8NHC7 312 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 YLPM1P49750 1951 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 TPP1O14773 563 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CSTBP04080 98 aaKnown RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 RELL1Q8IUW5 271 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 RBFAQ8N0V3 343 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 INO80EQ8NBZ0 244 aaPredicted RBP11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 THRSPQ92748 146 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 NINJ1Q92982 152 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 B3GAT2Q9NPZ5 323 aa11.2□□□□□ -0.62
PTCHD1-201ENST00000379361 CCRL2O00421 344 aa11.19□□□□□ -0.62
PTCHD1-201ENST00000379361 CD2P06729 351 aa11.19□□□□□ -0.62
PTCHD1-201ENST00000379361 TXNL4AP83876 142 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms