RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MYL9P24844 172 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 MPP1Q00013 466 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 EVX2Q03828 476 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 HYIQ5T013 277 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 UBAP2Q5T6F2 1119 aaKnown RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 N4BP2L1Q5TBK1 243 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 BICRALQ6AI39 1079 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CPA6Q8N4T0 437 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 FAM156AQ8NDB6 213 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 TAS1R2Q8TE23 839 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ZBTB18Q99592 522 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 TBC1D13Q9NVG8 400 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 NUFIP1Q9UHK0 495 aaKnown RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PLLPQ9Y342 182 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 MYH7P12883 1935 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SLC30A4O14863 429 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 LTN1O94822 1766 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SLITRK3O94933 977 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ARP10275 920 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CLUP10909 449 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 HERVK_113P63132 956 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 HIST2H2ACQ16777 129 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CBWD6Q4V339 395 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CBWD3Q5JTY5 395 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CBWD5Q5RIA9 395 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 DCLRE1AQ6PJP8 1040 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CREB3L2Q70SY1 520 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ANKS1BQ7Z6G8 1248 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 RHOXF1Q8NHV9 184 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SPRTNQ9H040 489 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 VPS33BQ9H267 617 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 VRTNQ9H8Y1 702 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 GCATO75600 419 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CLIC3O95833 236 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 FABP1P07148 127 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 HLA-DPA1P20036 260 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 DDOSTP39656 456 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 KLHL26Q53HC5 615 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PRMT9Q6P2P2 845 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 OR2T34Q8NGX1 318 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 OR2T3Q8NH03 318 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 GRIN3AQ8TCU5 1115 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 FBXL20Q96IG2 436 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 LRRC4Q9HBW1 653 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 MRM3Q9HC36 420 aaKnown RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 NIT2Q9NQR4 276 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SETD4Q9NVD3 440 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PNPOQ9NVS9 261 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ANAPC2Q9UJX6 822 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 RNF11Q9Y3C5 154 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 AIREO43918 545 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 APRTP07741 180 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PRKAR1AP10644 381 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ATP6V1B2P21281 511 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 MYF6P23409 242 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PCP4P48539 62 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PRMT2P55345 433 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 RPA4Q13156 261 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 FAM26DQ5JW98 314 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 OTOP1Q7RTM1 612 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CARM1Q86X55 608 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CYP2W1Q8TAV3 490 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 LNX1Q8TBB1 728 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 HYLS1Q96M11 299 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ZDHHC15Q96MV8 337 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 GFM1Q96RP9 751 aaKnown RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 FRMD8P1Q9BZ68 369 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 MED28Q9H204 178 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 ADAMTS10Q9H324 1103 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 RSAD1Q9HA92 442 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 PAK5Q9P286 719 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 TCRBV7S2A1N4TA0A589 114 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CCDC154A6NI56 674 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 KPNA3O00505 521 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 INPPL1O15357 1258 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 PGLSO95336 258 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 BMP4P12644 408 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 NCAM1P13591 858 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 TGM1P22735 817 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 RORAP35398 523 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 KCNJ5P48544 419 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 SNTA1Q13424 505 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CUL2Q13617 745 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CYP1B1Q16678 543 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF57Q68EA5 555 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 HAGHLQ6PII5 290 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-202ENST00000378161 CNSTQ6PJW8 725 aa11.73□□□□□ -0.53
NPHP4-202ENST00000378161 SV2AQ7L0J3 742 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms