RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NDST3O95803 873 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 NFKB1P19838 968 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 NOMO1Q15155 1222 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 HENMT1Q5T8I9 393 aaKnown RBP16.73■□□□□ 0.27
HMGN4-201ENST00000377575 LRRC57Q8N9N7 239 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 COX14Q96I36 57 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 OSBPL8Q9BZF1 889 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 FAM83DQ9H4H8 585 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 TRHDEQ9UKU6 1024 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 RAXQ9Y2V3 346 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 ZNF711Q9Y462 761 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
HMGN4-201ENST00000377575 H7C0C1 242 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 INPP4BO15327 924 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 SLC4A1P02730 911 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 GLB1P16278 677 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 CD68P34810 354 aaPredicted RBP16.72■□□□□ 0.27
HMGN4-201ENST00000377575 ATP5OP48047 213 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 POLD2P49005 469 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 DCDC1P59894 354 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 ISXQ2M1V0 245 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 C14orf28Q4W4Y0 310 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 FAM182AQ5T1J6 154 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 CERCAMQ5T4B2 595 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 OGFOD3Q6PK18 319 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 PEX26Q7Z412 305 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 TRIM74Q86UV6 250 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 GALNT13Q8IUC8 556 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 CDKL3Q8IVW4 592 aaPredicted RBP16.72■□□□□ 0.27
HMGN4-201ENST00000377575 ZNF567Q8N184 647 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 UBL4BQ8N7F7 174 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 CCL4L1Q8NHW4 92 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 SCARF2Q96GP6 870 aaPredicted RBP16.72■□□□□ 0.27
HMGN4-201ENST00000377575 OR2M4Q96R27 311 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 FCRL5Q96RD9 977 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 AGAP2Q99490 1192 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 DESI2Q9BSY9 194 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 GPR63Q9BZJ6 419 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 UBP1Q9NZI7 540 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 VPS18Q9P253 973 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 CFAP47Q6ZTR5 3102 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 LAMA5O15230 3695 aa16.72■□□□□ 0.27
HMGN4-201ENST00000377575 ZFHX4Q86UP3 3567 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 CELSR3Q9NYQ7 3312 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 MIF4GDA9UHW6 222 aaKnown RBP16.71■□□□□ 0.27
HMGN4-201ENST00000377575 NOBOXO60393 691 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 BRINP1O60477 761 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 USP12O75317 370 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ZNF189O75820 626 aaPredicted RBP16.71■□□□□ 0.27
HMGN4-201ENST00000377575 TJP3O95049 919 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ASMTLO95671 621 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 PIRTP0C851 137 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 PNLIPP16233 465 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ADCY8P40145 1251 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 GSDMDP57764 484 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 OTUD4Q01804 1114 aaKnown RBP16.71■□□□□ 0.27
HMGN4-201ENST00000377575 MPP3Q13368 585 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 LRP8Q14114 963 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ZNF569Q5MCW4 686 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ITPRIPL1Q6GPH6 555 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 PID1Q7Z2X4 250 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ZDHHC1Q8WTX9 485 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 ZSCAN5AQ9BUG6 496 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 TAAR2Q9P1P5 351 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 NFKBIL1Q9UBC1 381 aaPredicted RBP16.71■□□□□ 0.27
HMGN4-201ENST00000377575 RSPH14Q9UHP6 348 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 SHOC2Q9UQ13 582 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 TMEM98Q9Y2Y6 226 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 GPSM3Q9Y4H4 160 aa16.71■□□□□ 0.27
HMGN4-201ENST00000377575 DSPP15924 2871 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 NTN3O00634 580 aaPredicted RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 NUDT21O43809 227 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 STK10O94804 968 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 FUCA1P04066 466 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 AK4P27144 223 aaPredicted RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ACTN2P35609 894 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ACTR1BP42025 376 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 WNT3AP56704 352 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ACTR1AP61163 376 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 GABREP78334 506 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 CTBSQ01459 385 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 HLTFQ14527 1009 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 PDPK2PQ6A1A2 396 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 KDELC1Q6UW63 502 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 MARK2Q7KZI7 788 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 TMC3Q7Z5M5 1100 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 NRROSQ86YC3 692 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 CCNJLQ8IV13 435 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 LSMEM2Q8N112 164 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ACTL9Q8TC94 416 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ALG3Q92685 438 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 GFM1Q96RP9 751 aaKnown RBP16.7■□□□□ 0.26
HMGN4-201ENST00000377575 WDR24Q96S15 920 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 SPATA16Q9BXB7 569 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 FSD1LQ9BXM9 530 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 TSGA10Q9BZW7 698 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms