RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CTGFP29279 349 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 YAP1P46937 504 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 LRP8Q14114 963 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 C18orf21Q32NC0 220 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 SPOUT1Q5T280 376 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 CPNE9Q8IYJ1 553 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 RNF145Q96MT1 663 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 MEAF6Q9HAF1 191 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 RHBDL2Q9NX52 303 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 SLAMF8Q9P0V8 285 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 SOCS2O14508 198 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 OR4F21O95013 312 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 NRG1Q02297 640 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 CREB5Q02930 508 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 LPCAT2Q7L5N7 544 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 FUNDC1Q8IVP5 155 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 MCMBPQ9BTE3 642 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 MFSD1Q9H3U5 465 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 HACD3Q9P035 362 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
USP11-204ENST00000377107 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
USP11-204ENST00000377107 PRSS51A0A1B0GVH4 220 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 H0Y626 953 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 NME4O00746 187 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 PFDN1O60925 122 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 ECI2O75521 394 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 RPP40O75818 363 aaKnown RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 TRIM16O95361 564 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 MMP2P08253 660 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 SMIM18P0DKX4 95 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 ZNF37AP17032 561 aaPredicted RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 TACR2P21452 398 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 DNAJB13P59910 316 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 INPP5AQ14642 412 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 HERC3Q15034 1050 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 UGT3A1Q6NUS8 523 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CHSY3Q70JA7 882 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 ARRDC2Q8TBH0 407 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 STAG3L4Q8TBR4 150 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 PPP1R2P1Q96PQ5 205 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 NMRK2Q9NPI5 230 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 C2orf81A6NN90 581 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 M0QZQ0 153 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 IGLV3-25P01717 112 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 HK2P52789 917 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 UFM1P61960 85 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 MANEALQ5VSG8 457 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 B3GNT6Q6ZMB0 384 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 MILR1Q7Z6M3 343 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 UMODL1-AS1Q8N2C9 162 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 OR2T34Q8NGX1 318 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 OR2T3Q8NH03 318 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 LINGO1Q96FE5 620 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 UBXN10Q96LJ8 280 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 KCTD14Q9BQ13 255 aaPredicted RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 GPR63Q9BZJ6 419 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 BPTFQ12830 3046 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 SMIM31A0A1B0GVY4 71 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 RHOCP08134 193 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 ADSLP30566 484 aaPredicted RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 MC4RP32245 332 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 NDST2P52849 883 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 PRKCQQ04759 706 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 NR6A1Q15406 480 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CLLU1OSQ5K130 101 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 METTL6Q8TCB7 284 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 SNRNP27Q8WVK2 155 aaKnown RBP12.87□□□□□ -0.35
USP11-204ENST00000377107 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 GID8Q9NWU2 228 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 POLG2Q9UHN1 485 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 OAZ3Q9UMX2 235 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 MYRFQ9Y2G1 1151 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
USP11-204ENST00000377107 CCDC154A6NI56 674 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 SNAP91O60641 907 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 GJB5O95377 273 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 FAM163BP0C2L3 166 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 OXTRP30559 389 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 SERINC3Q13530 473 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 NEDD8Q15843 81 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 PELI3Q8N2H9 469 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms