RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RNF145Q96MT1 663 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 MPHOSPH6Q99547 160 aaKnown RBP16.47■□□□□ 0.23
TRIM39-201ENST00000376656 ATAD3AQ9NVI7 634 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 PCDHGA11Q9Y5H2 935 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 CCL22O00626 93 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 AQP9O43315 295 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 E2F6O75461 281 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 LEPRP48357 1165 aaKnown RBP16.47■□□□□ 0.23
TRIM39-201ENST00000376656 TAF6P49848 677 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 HERVK_113P63132 956 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 PIGFQ07326 219 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 TUBA3CQ13748 450 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 KIAA0319Q5VV43 1072 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 PTRH1Q86Y79 214 aaKnown RBP16.47■□□□□ 0.23
TRIM39-201ENST00000376656 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
TRIM39-201ENST00000376656 SLC22A17Q8WUG5 538 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 PTCD2Q8WV60 388 aaKnown RBP16.47■□□□□ 0.23
TRIM39-201ENST00000376656 ZNF347Q96SE7 839 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 ERVK-6Q9BXR3 956 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 MROQ9BYG7 248 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 LTB4R2Q9NPC1 389 aa16.47■□□□□ 0.23
TRIM39-201ENST00000376656 SMIM28A0A1B0GU29 152 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 AZIN1O14977 448 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 MATN4O95460 622 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 TCF3P15923 654 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 IGFBP6P24592 240 aaPredicted RBP16.46■□□□□ 0.23
TRIM39-201ENST00000376656 RAD23AP54725 363 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 ARHGAP1Q07960 439 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 SLC14A2Q15849 920 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 KIAA0408Q6ZU52 694 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 PTGR2Q8N8N7 351 aaPredicted RBP16.46■□□□□ 0.23
TRIM39-201ENST00000376656 PDZD8Q8NEN9 1154 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 NRBF2Q96F24 287 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 MRGPRX2Q96LB1 330 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 TRIM54Q9BYV2 358 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 NTN4Q9HB63 628 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 SACM1LQ9NTJ5 587 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 GMIPQ9P107 970 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 WARS2Q9UGM6 360 aaKnown RBP16.46■□□□□ 0.23
TRIM39-201ENST00000376656 POLG2Q9UHN1 485 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 HLA-DQB2P05538 268 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 HRH2P25021 359 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 EEF1DP29692 281 aaKnown RBP16.46■□□□□ 0.23
TRIM39-201ENST00000376656 CASP2P42575 452 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 GEMP55040 296 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 FOXM1Q08050 763 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 TTLL4Q14679 1199 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 SPARTQ8N0X7 666 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 ATPAF2Q8N5M1 289 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 OSCP1Q8WVF1 389 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 FKBP10Q96AY3 582 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 TSPAN17Q96FV3 270 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 ZNF560Q96MR9 790 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 TMEM30AQ9NV96 361 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 TMED5Q9Y3A6 229 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 GPC6Q9Y625 555 aaPredicted RBP16.46■□□□□ 0.23
TRIM39-201ENST00000376656 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
TRIM39-201ENST00000376656 A0A1B0GTL3 188 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 BCAS1O75363 584 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-201ENST00000376656 LBPP18428 481 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CRHBPP24387 322 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 HPCAL1P37235 193 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 ARSFP54793 590 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 ARMCX2Q7L311 632 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 ARHGAP12Q8IWW6 846 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 KIAA2013Q8IYS2 634 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CADM3Q8N126 398 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 FUNDC2Q9BWH2 189 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 ENTPD7Q9NQZ7 604 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CLDN25C9JDP6 229 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CNMDO75829 334 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CCNCP24863 283 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CBX2Q14781 532 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-201ENST00000376656 IMPG1Q17R60 797 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 RANBP10Q6VN20 620 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 LIMS2Q7Z4I7 341 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 IL12RB2Q99665 862 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 DGCR6LQ9BY27 220 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 SIK2Q9H0K1 926 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 POLR3BQ9NW08 1133 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-201ENST00000376656 TSC22D4Q9Y3Q8 395 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 AXIN1O15169 862 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 XYLBO75191 536 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 UMPSP11172 480 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 ECT2LQ008S8 904 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 PM20D1Q6GTS8 502 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CRTC3Q6UUV7 619 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 CCDC117Q8IWD4 279 aaPredicted RBP16.45■□□□□ 0.22
TRIM39-201ENST00000376656 BDH2Q9BUT1 245 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 ITGB1BP2Q9UKP3 347 aa16.45■□□□□ 0.22
TRIM39-201ENST00000376656 A0A1W2PP18 115 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 UPK1AO00322 258 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 MAFKO60675 156 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 JRKO75564 520 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 WISP3O95389 354 aaPredicted RBP16.44■□□□□ 0.22
TRIM39-201ENST00000376656 CD4P01730 458 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 SLC4A1P02730 911 aa16.44■□□□□ 0.22
TRIM39-201ENST00000376656 HTR1AP08908 422 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms