RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 LAYNQ6UX15 382 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 EPHX4Q8IUS5 362 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 PAPD5Q8NDF8 572 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 DNAJC1Q96KC8 554 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 MYRFLQ96LU7 910 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 TMEM79Q9BSE2 394 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 POLR1EQ9GZS1 481 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 POLG2Q9UHN1 485 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 SLC8A2Q9UPR5 921 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 ZNF839A8K0R7 811 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 GJB3O75712 270 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 RPS17P08708 135 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 MYF6P23409 242 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 GPR15P49685 360 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 CDK9P50750 372 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 YBX1P67809 324 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 RING1Q06587 406 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 POLD3Q15054 466 aaPredicted RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 EML3Q32P44 896 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 KCTD21Q4G0X4 260 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 ZBTB49Q6ZSB9 765 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 SPRED1Q7Z699 444 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 DCP1BQ8IZD4 617 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 OR4L1Q8NH43 312 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 LRRC58Q96CX6 371 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 ZNF512Q96ME7 567 aaPredicted RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 ZNF599Q96NL3 588 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 MUC13Q9H3R2 512 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 MID1IP1Q9NPA3 183 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 C8orf4Q9NR00 106 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.64□□□□□ -0.716e-6■■■■□ 19.3
ABCF1-202ENST00000376545 NLE1Q9NVX2 485 aaPredicted RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 TMEM45AQ9NWC5 275 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 GMIPQ9P107 970 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 PTBP2Q9UKA9 531 aaKnown RBP10.64□□□□□ -0.71
ABCF1-202ENST00000376545 PTGDR2Q9Y5Y4 395 aa10.64□□□□□ -0.71
ABCF1-202ENST00000376545 TCRBV5S2A0A599 114 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 LCHNA4D1U4 455 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 LRRC14BA6NHZ5 514 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CLASP2O75122 1294 aaKnown RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 TRPA1O75762 1119 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 IDO1P14902 403 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CKMT2P17540 419 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 LBPP18428 481 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CD9P21926 228 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 FGFR3P22607 806 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CCT8P50990 548 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 VPS26BQ4G0F5 336 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 PITRM1Q5JRX3 1037 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 DNAJC14Q6Y2X3 702 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 RAB44Q7Z6P3 723 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 SCN4BQ8IWT1 228 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 C2orf69Q8N8R5 385 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 GRIN3AQ8TCU5 1115 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 NSUN5Q96P11 429 aaKnown RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 SEMA3CQ99985 751 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 SYT17Q9BSW7 474 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CATSPERZQ9NTU4 200 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 A0A1B0GTL3 188 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 ASPDHA6ND91 283 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 ACOX3O15254 700 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 RAMP2O60895 175 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 THPOP40225 353 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 ZNF140P52738 457 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CLCQ05315 142 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 LCP2Q13094 533 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 PTPRCAPQ14761 206 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 ATP6AP1Q15904 470 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 NFE2Q16621 373 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 DDR2Q16832 855 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 SPATA19Q7Z5L4 167 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CAMK1DQ8IU85 385 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 ADGRG5Q8IZF4 528 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 DRAXINQ8NBI3 349 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 OR13C4Q8NGS5 318 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 TMEM125Q96AQ2 219 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CDKN2AIPNLQ96HQ2 116 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 TRIM54Q9BYV2 358 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 TRIM15Q9C019 465 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 BRINP2Q9C0B6 783 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CLK4Q9HAZ1 481 aaKnown RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 OLA1Q9NTK5 396 aaKnown RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 GID8Q9NWU2 228 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 ABI2Q9NYB9 513 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-202ENST00000376545 IKZF3Q9UKT9 509 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 CLEC11AQ9Y240 323 aa10.63□□□□□ -0.71
ABCF1-202ENST00000376545 DHRS12A0PJE2 317 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 NR5A2O00482 541 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 STX16O14662 325 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 AKAP10O43572 662 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 TRMUO75648 421 aaKnown RBP10.62□□□□□ -0.71
ABCF1-202ENST00000376545 MT-CO1P00395 513 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 CDK4P11802 303 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 RCAN2Q14206 197 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 PFKFB4Q16877 469 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 SLC36A3Q495N2 470 aa10.62□□□□□ -0.71
ABCF1-202ENST00000376545 SDHAF4Q5VUM1 108 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms