RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TFEBP19484 476 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 GSTM2P28161 218 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 MAGEA3P43357 314 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ENPEPQ07075 957 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CASC4Q6P4E1 433 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 RALGPS2Q86X27 583 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 HACE1Q8IYU2 909 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 NETO2Q8NC67 525 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 PIK3C3Q8NEB9 887 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 RMDN1Q96DB5 314 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SLC45A3Q96JT2 553 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SNX18Q96RF0 628 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CLSTN3Q9BQT9 956 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 STMN3Q9NZ72 180 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 OAZ3Q9UMX2 235 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 EIF3LQ9Y262 564 aaKnown RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 DHRS12A0PJE2 317 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 FAM149AA5PLN7 773 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 EI24O14681 340 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CHRNGP07510 517 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 HOXC8P31273 242 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 POLD3Q15054 466 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 XAF1Q6GPH4 301 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SPRED1Q7Z699 444 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ELMOD2Q8IZ81 293 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 OSCP1Q8WVF1 389 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 MAGEB5Q9BZ81 275 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 RETREG1Q9H6L5 497 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 AGPAT4Q9NRZ5 378 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 CD300AQ9UGN4 299 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SARDHQ9UL12 918 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
C9orf3-203ENST00000375315 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-203ENST00000375315 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 E2F8A0AVK6 867 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 MYBPHLA2RUH7 354 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 RAD51BO15315 384 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 GRID2O43424 1007 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 B4GALT3O60512 393 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 BEST1O76090 585 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 MFN2O95140 757 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 PIGNO95427 931 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 PSMA4P25789 261 aaKnown RBP12.12□□□□□ -0.47
C9orf3-203ENST00000375315 NDUFV1P49821 464 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 MGAT3Q09327 533 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 NIPAL4Q0D2K0 466 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 BST2Q10589 180 aaKnown RBP12.12□□□□□ -0.47
C9orf3-203ENST00000375315 TIGD5Q53EQ6 642 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 CYBRD1Q53TN4 286 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 SLC17A6Q9P2U8 582 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF221Q9UK13 617 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 ARVCFO00192 962 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 PIRO00625 290 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 NRP1O14786 923 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 TPST1O60507 370 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 FKBP9O95302 570 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 FCGR1AP12314 374 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 M6PRP20645 277 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
C9orf3-203ENST00000375315 PRR23CQ6ZRP0 262 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 FAM183BPQ6ZVS7 135 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 DDIASQ8IXT1 998 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 OR7A2PQ8NGA2 310 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 RTP4Q96DX8 246 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 BTN2A3PQ96KV6 586 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 TMEM209Q96SK2 561 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF518BQ9C0D4 1074 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 IRF2BPLQ9H1B7 796 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 GIMAP4Q9NUV9 329 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 TBC1D13Q9NVG8 400 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 CNTN6Q9UQ52 1028 aa12.12□□□□□ -0.47
C9orf3-203ENST00000375315 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 G3V2L1 256 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ALDH1A2O94788 518 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ALBP02768 609 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CD40LGP29965 261 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 PPP5CP53041 499 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SLC13A2Q13183 592 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 NFE2Q16621 373 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 REP15Q6BDI9 236 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ZCCHC8Q6NZY4 707 aaKnown RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 USP51Q70EK9 711 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 AQP12AQ8IXF9 295 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ABI1Q8IZP0 508 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 NATD1Q8N6N6 113 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms