RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HIPK4Q8NE63 616 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SHKBP1Q8TBC3 707 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 JADE3Q92613 823 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 EXT2Q93063 718 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 FAM136AQ96C01 138 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 RNF38Q9H0F5 515 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 ZBTB26Q9HCK0 441 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 RIMKLBQ9ULI2 386 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 POMPQ9Y244 141 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 COPG1Q9Y678 874 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 C2orf78A6NCI8 922 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SDHDO14521 159 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 PRRG1O14668 218 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 OGNP20774 298 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 FDXRP22570 491 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CDC25CP30307 473 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 MTTPP55157 894 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 ART3Q13508 389 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SEMA3AQ14563 771 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 ANKRD54Q6NXT1 300 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CHST9Q7L1S5 443 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 DSELQ8IZU8 1212 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 LPCAT1Q8NF37 534 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 OR4K2Q8NGD2 314 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 PYDC1Q8WXC3 89 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 MAELQ96JY0 434 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 TRMOQ9BU70 441 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 ADGRE3Q9BY15 652 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 EFCAB1Q9HAE3 211 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 S100A14Q9HCY8 104 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 CD320Q9NPF0 282 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 INTS10Q9NVR2 710 aaKnown RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 NLE1Q9NVX2 485 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-202ENST00000374487 SMPD4Q9NXE4 827 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 PPM1HQ9ULR3 514 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 PCDHGC4Q9Y5F7 938 aa12.06□□□□□ -0.48
HMGCL-202ENST00000374487 GPC4O75487 556 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 NDUFS3O75489 264 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ABLIM3O94929 683 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 WISP3O95389 354 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 C1RP00736 705 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 PENKP01210 267 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CD1EP15812 388 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CD1DP15813 335 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 KCNC1P48547 511 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 SATB1Q01826 763 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CYTH1Q15438 398 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TAF1AQ15573 450 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 RARS2Q5T160 578 aaKnown RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TPGS2Q68CL5 300 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 RAB44Q7Z6P3 723 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 SH3RF2Q8TEC5 729 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 PPP2R3CQ969Q6 453 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 RCN3Q96D15 328 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 MYRFLQ96LU7 910 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 EMILIN2Q9BXX0 1053 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 S1PR5Q9H228 398 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF385DQ9H6B1 395 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 YY1AP1Q9H869 796 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 MRGBPQ9NV56 204 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 HSFX1Q9UBD0 423 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 PRPF19Q9UMS4 504 aaKnown RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TBC1D30Q9Y2I9 924 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TRAF6Q9Y4K3 522 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 YIPF1Q9Y548 306 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 SPO11Q9Y5K1 396 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 H0Y626 953 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CFLARO15519 480 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 MBTPS2O43462 519 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 RHOBTB1O94844 696 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 PDHA1P08559 390 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ENO3P13929 434 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF37AP17032 561 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TSPAN8P19075 237 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 FMO4P31512 558 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF140P52738 457 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 HERVK_113P63132 956 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CCNIQ14094 377 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 HERC3Q15034 1050 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 LEXMQ3ZCV2 418 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF678Q5SXM1 525 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 LINGO4Q6UY18 593 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TTC16Q8NEE8 873 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ST13P5Q8NFI4 369 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 PTERQ96BW5 349 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 L3HYPDHQ96EM0 354 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CDRT15Q96T59 188 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 AARSD1Q9BTE6 412 aaKnown RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 KLF16Q9BXK1 252 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 ERVK-6Q9BXR3 956 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TDRD1Q9BXT4 1180 aaKnown RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CXorf56Q9H5V9 222 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 POPDC3Q9HBV1 291 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms