RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 FMO1Q01740 532 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 RIPK1Q13546 671 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 COL9A3Q14050 684 aaPredicted RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ARSHQ5FYA8 562 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 NT5DC1Q5TFE4 455 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PIK3R6Q5UE93 754 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 KATNAL2Q8IYT4 538 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF483Q8TF39 744 aaPredicted RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 SPATA13Q96N96 652 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 PRDM12Q9H4Q4 367 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 EURLQ9NYK6 297 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 RSL24D1Q9UHA3 163 aaKnown RBP14.29□□□□□ -0.12
TRAF1-201ENST00000373887 C3orf18Q9UK00 162 aa14.29□□□□□ -0.12
TRAF1-201ENST00000373887 COL1A2P08123 1366 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 RRP1BQ14684 758 aaKnown RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 UNC5AQ6ZN44 842 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 HOMEZQ8IX15 550 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 PANX1Q96RD7 426 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 OAS3Q9Y6K5 1087 aaKnown RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 MARCKSL1P49006 195 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SULT1C3Q6IMI6 304 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 TRIM40Q6P9F5 258 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 ALYREFQ86V81 257 aaKnown RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 NPAS4Q8IUM7 802 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SLC34A3Q8N130 599 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 POLR3HQ9Y535 204 aaPredicted RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 U3KQV3 271 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SLC28A1O00337 649 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 LGR5O75473 907 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 MAT2AP31153 395 aaKnown RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 ARL14EPQ8N8R7 260 aaPredicted RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 TSEN2Q8NCE0 465 aaKnown RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 JOSD2Q8TAC2 188 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SETD6Q8TBK2 473 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SLC9A6Q92581 669 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 LPIN3Q9BQK8 851 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 EQTNQ9NQ60 294 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 GDF3Q9NR23 364 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 DEC1Q9P2X7 70 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 AP3M1Q9Y2T2 418 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 UBR1Q8IWV7 1749 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SERPINA1P01009 418 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 GIMD1P0DJR0 217 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 CAPGP40121 348 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 FOLH1Q04609 750 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 RGS1Q08116 209 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 OAFQ86UD1 273 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 UPF1Q92900 1129 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 PLGRKTQ9HBL7 147 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 SIN3BO75182 1162 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 IFNA6P05013 189 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 HGFP14210 728 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 TFEBP19484 476 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 ARFIP1P53367 373 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 PWWP2AQ96N64 755 aa14.28□□□□□ -0.12
TRAF1-201ENST00000373887 INTS7Q9NVH2 962 aaKnown RBP14.28□□□□□ -0.12
TRAF1-201ENST00000373887 PSMD9O00233 223 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 TRIM38O00635 465 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 KLRC4O43908 158 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 AVILO75366 819 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 RASGRP1O95267 797 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 TFPIP10646 304 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 NRG1Q02297 640 aaPredicted RBP14.27□□□□□ -0.12
TRAF1-201ENST00000373887 MTX3Q5HYI7 312 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 ATCAYQ86WG3 371 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 TCAIMQ8N3R3 496 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF433Q8N7K0 673 aaPredicted RBP14.27□□□□□ -0.12
TRAF1-201ENST00000373887 GIPC3Q8TF64 312 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 FATE1Q969F0 183 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 INPP4AQ96PE3 977 aaPredicted RBP14.27□□□□□ -0.12
TRAF1-201ENST00000373887 EVLQ9UI08 416 aaPredicted RBP14.27□□□□□ -0.12
TRAF1-201ENST00000373887 ASF1AQ9Y294 204 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 ZNF780BQ9Y6R6 833 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 EME2A4GXA9 379 aaPredicted RBP14.27□□□□□ -0.12
TRAF1-201ENST00000373887 FAM172BPA6NC97 362 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 G3V2T6 193 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 CACNB4O00305 520 aaPredicted RBP14.27□□□□□ -0.12
TRAF1-201ENST00000373887 CCL5P13501 91 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 CXCR2P25025 360 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 CTBP1Q13363 440 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 HKDC1Q2TB90 917 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 ATP6V1C2Q8NEY4 427 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 OR2L5Q8NG80 312 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 VAT1Q99536 393 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 CLDND1Q9NY35 253 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 PFDN2Q9UHV9 154 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 CORO2BQ9UQ03 480 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 SNX10Q9Y5X0 201 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 DGKBQ9Y6T7 804 aa14.27□□□□□ -0.12
TRAF1-201ENST00000373887 GRM6O15303 877 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 CST3P01034 146 aaPredicted RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 UGT2B4P06133 528 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 CDH3P22223 829 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MC4RP32245 332 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MC1RQ01726 317 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 SMU1Q2TAY7 513 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 DHDDSQ86SQ9 333 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms