RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 ZKSCAN5Q9Y2L8 839 aa11.96□□□□□ -0.49
HDAC8-201ENST00000373554 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.49
HDAC8-201ENST00000373554 CFAP47Q6ZTR5 3102 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 AURKAO14965 403 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 INPP4BO15327 924 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 HYAL3O43820 417 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-201ENST00000373554 RFPL3O75679 317 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 AGTP01019 485 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 IFNB1P01574 187 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 CDK4P11802 303 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 DUSP3P51452 185 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-201ENST00000373554 SHC2P98077 582 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 CCDC173Q0VFZ6 552 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 ILKQ13418 452 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 SNX1Q13596 522 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 TCEA2Q15560 299 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 LONRF2Q1L5Z9 754 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 ZNF569Q5MCW4 686 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 C6orf132Q5T0Z8 1188 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 ZDHHC20Q5W0Z9 365 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 KCTD16Q68DU8 428 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 PDPK2PQ6A1A2 396 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 LVRNQ6Q4G3 990 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 RANBP10Q6VN20 620 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 RAB44Q7Z6P3 723 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-201ENST00000373554 SLCO6A1Q86UG4 719 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 TRIM74Q86UV6 250 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 CCDC89Q8N998 374 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 GPR26Q8NDV2 337 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 EID2BQ96D98 161 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 APOLD1Q96LR9 279 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 PLEKHG4BQ96PX9 1271 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 WDR24Q96S15 920 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 AGAP2Q99490 1192 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 TBL1YQ9BQ87 522 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 APOL2Q9BQE5 337 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 ZSCAN5AQ9BUG6 496 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 SPATA16Q9BXB7 569 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 CLPBQ9H078 707 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-201ENST00000373554 SLC17A4Q9Y2C5 497 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 PKP3Q9Y446 797 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 LRP4O75096 1905 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
HDAC8-201ENST00000373554 FADS2P1A8MWK0 482 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 YY2O15391 372 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 DKK1O94907 266 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 METTL18O95568 372 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 ASMTLO95671 621 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 CEACAM5P06731 702 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 IVLP07476 585 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 CELA2BP08218 269 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-201ENST00000373554 CKMT1AP12532 417 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 BPIP17213 487 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 ACP1P24666 158 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 ADRA1AP35348 466 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 GNPDA1P46926 289 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 RPIAP49247 311 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 ILF3Q12906 894 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDAC8-201ENST00000373554 CCNG2Q16589 344 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 DRICH1Q6PGQ1 229 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-201ENST00000373554 TAF8Q7Z7C8 310 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 CHCHD4Q8N4Q1 142 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 TRAM1L1Q8N609 369 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 COX14Q96I36 57 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 PBKQ96KB5 322 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 TMEM168Q9H0V1 697 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 LRRC40Q9H9A6 602 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 BPIFA1Q9NP55 256 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 HOMER3Q9NSC5 361 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 TRNAU1APQ9NX07 287 aaKnown RBP11.94□□□□□ -0.5
HDAC8-201ENST00000373554 VPS18Q9P253 973 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 FEZ2Q9UHY8 353 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-201ENST00000373554 SUFUQ9UMX1 484 aa11.94□□□□□ -0.5
HDAC8-201ENST00000373554 TDRD6O60522 2096 aaKnown RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 C2orf81A6NN90 581 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 ERI2A8K979 691 aaKnown RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 E7EVH7 732 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 STX7O15400 261 aaKnown RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 PSMD3O43242 534 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 USP12O75317 370 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 SLC25A14O95258 325 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 CRTAMO95727 393 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 AP2A1O95782 977 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 SPAM1P38567 509 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 POLD2P49005 469 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 PDE1BQ01064 536 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 OLIG2Q13516 323 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 SPARCL1Q14515 664 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 NR0B2Q15466 257 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 SIX1Q15475 284 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 TAF1AQ15573 450 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 DHRS13Q6UX07 377 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 MARK2Q7KZI7 788 aaKnown RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 GSTA5Q7RTV2 222 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms