RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NR2F6P10588 404 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 CTSEP14091 401 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 OR1D2P34982 312 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 MED22Q15528 200 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 CCL14Q16627 93 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZIK1Q3SY52 487 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 IRAK1BP1Q5VVH5 260 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 ABHD15Q6UXT9 468 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 INO80EQ8NBZ0 244 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 BBS4Q96RK4 519 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TBC1D14Q9P2M4 693 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 AKAP12Q02952 1782 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 CCL16O15467 120 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TNFSF9P41273 254 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 DPYSQ14117 519 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 MYBPC3Q14896 1274 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 HERC3Q15034 1050 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 PCID2Q5JVF3 399 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 CDKL4Q5MAI5 379 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 ANO7Q6IWH7 933 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 OFCC1Q8IZS5 231 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 RNF148Q8N7C7 305 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 LYVE1Q9Y5Y7 322 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 KCNH1O95259 989 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 SYN1P17600 705 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 RPL35P42766 123 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 GTF2BQ00403 316 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 BLMHQ13867 455 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 XKRXQ6PP77 449 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 CRTC1Q6UUV9 634 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 DENND1CQ8IV53 801 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 OR52L1Q8NGH7 329 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 INPP4AQ96PE3 977 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 UQCC2Q9BRT2 126 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZCCHC2Q9C0B9 1178 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 DYRK1BQ9Y463 629 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 DPPA5A6NC42 116 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 TIE1P35590 1138 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 THOP1P52888 689 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 TUSC3Q13454 348 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 UBXN11Q5T124 520 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 DOK6Q6PKX4 331 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 POU5F2Q8N7G0 328 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 CXorf40AQ8TE69 158 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 HERC2P3Q9BVR0 1158 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 NXF3Q9H4D5 531 aaKnown RBP14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 WDR41Q9HAD4 459 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 ABCB9Q9NP78 766 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 KCNK4Q9NYG8 393 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 DRG1Q9Y295 367 aaKnown RBP14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 GNG14A0A1W2PPG7 69 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 MTA2O94776 668 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 POLR2LP62875 67 aaKnown RBP14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 BATFQ16520 125 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 SERPINA13PQ6UXR4 307 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 CFAP206Q8IYR0 622 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 TMEM161BQ8NDZ6 487 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 TRNT1Q96Q11 434 aaKnown RBP14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 LRRC40Q9H9A6 602 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 VPS45Q9NRW7 570 aa14.02□□□□□ -0.16
RAPGEF1-202ENST00000372190 DYRK3O43781 588 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 TSPAN1O60635 241 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 PGRP06401 933 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 GABRR2P28476 465 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 RTP1P59025 263 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 LZTR1Q8N653 840 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 POP5Q969H6 163 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 TUBG2Q9NRH3 451 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 KCND1Q9NSA2 647 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 PCDHA2Q9Y5H9 948 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 PDPK1O15530 556 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 MPOP05164 745 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 DCDC1P59894 354 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 TRMT11Q7Z4G4 463 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 LHFPL3Q86UP9 236 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 NPAS4Q8IUM7 802 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 OXR1Q8N573 874 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 DNAJA4Q8WW22 397 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 KAT2BQ92831 832 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 LIN37Q96GY3 246 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 KCNS3Q9BQ31 491 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 LEF1Q9UJU2 399 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 HIF3AQ9Y2N7 669 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 FAM208AQ9UK61 1670 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 SCAMP3O14828 347 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 TBL1XO60907 577 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 FGFR1P11362 822 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 FRG1Q14331 258 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 NR6A1Q15406 480 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 RNF43Q68DV7 783 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 ILDR2Q71H61 639 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 ZNF438Q7Z4V0 828 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 C12orf43Q96C57 262 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 MAGEB10Q96LZ2 347 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 MTMR10Q9NXD2 777 aa14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 MRPL42Q9Y6G3 142 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-202ENST00000372190 DGKBQ9Y6T7 804 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms