RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ARHGEF26Q96DR7 871 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TXNDC15Q96J42 360 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 PGLYRP2Q96PD5 576 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 UQCC2Q9BRT2 126 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 DUSP15Q9H1R2 295 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 RSPH9Q9H1X1 276 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CAAP1Q9H8G2 361 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 FANCEQ9HB96 536 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 WHRNQ9P202 907 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 GRID1Q9ULK0 1009 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TNRC6AQ8NDV7 1962 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ANKRD62A6NC57 917 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 WASH3PC4AMC7 463 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 MCF2LO15068 1137 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 DAB1O75553 588 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 FAM155BO75949 473 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 NCAM1P13591 858 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CES1P23141 567 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CHRNA3P32297 505 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 C21orf59P57076 290 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 RPL10AP62906 217 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 PTK2BQ14289 1009 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 DHCR24Q15392 516 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 MMEL1Q495T6 779 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 UBAP2Q5T6F2 1119 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 OTOAQ7RTW8 1153 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CATSPER1Q8NEC5 780 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 BPIFB1Q8TDL5 484 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 DNASE2BQ8WZ79 361 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 RPRD1AQ96P16 312 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 FAM193BQ96PV7 902 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 NUP85Q9BW27 656 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 MRPL1Q9BYD6 325 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 KCNK13Q9HB14 408 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CYP4F11Q9HBI6 524 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 HEBP1Q9NRV9 189 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TMEM9Q9P0T7 183 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TNFRSF10DQ9UBN6 386 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ANAPC7Q9UJX3 599 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ADAMTS6Q9UKP5 1117 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CFL2Q9Y281 166 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ANGPTL3Q9Y5C1 460 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 GOLGA8SH3BPF8 625 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF254O75437 659 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 CYP11B1P15538 503 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 DCKP27707 260 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GNA15P30679 374 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 PTPN9P43378 593 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 SLC6A11P48066 632 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 PCYT1AP49585 367 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 PTPN5P54829 565 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GRSF1Q12849 480 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ORC1Q13415 861 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 CES5AQ6NT32 575 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ANKS1BQ7Z6G8 1248 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GLRX5Q86SX6 157 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 BBS7Q8IWZ6 715 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ULK2Q8IYT8 1036 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 TMCO5AQ8N6Q1 288 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 DTX3LQ8TDB6 740 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 LOXL4Q96JB6 756 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 SIAEQ9HAT2 523 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ENAMQ9NRM1 1142 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 DDX56Q9NY93 547 aaKnown RBP6.87□□□□□ -1.31
CSDE1-204ENST00000369530 NKIRAS1Q9NYS0 192 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 SLC7A8Q9UHI5 535 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GOLGA8QA0A0J9YX86 632 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GOLGA8OA6NCC3 632 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 MIF4GDA9UHW6 222 aaKnown RBP6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GOLGA8NF8WBI6 632 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GOLGA8RI6L899 631 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 IRAK2O43187 625 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 TYROBPO43914 113 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 SNX2O60749 519 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 CDH16O75309 829 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 GPC4O75487 556 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ZBTB11O95625 1053 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-204ENST00000369530 CPOXP36551 454 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 PGM1P36871 562 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 P2RY2P41231 377 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 BCAT1P54687 386 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 EPHB3P54753 998 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 COG7P83436 770 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 STX3Q13277 289 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 SPARCL1Q14515 664 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 PPP2R5DQ14738 602 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 MAPRE2Q15555 327 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 LIN9Q5TKA1 542 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF449Q6P9G9 518 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 Q6ZS52 159 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 CCDC25Q86WR0 208 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 DCLK2Q8N568 766 aa6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF564Q8TBZ8 553 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-204ENST00000369530 ZUFSPQ96AP4 578 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms