RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SULT2A1Q06520 285 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 IL10RBQ08334 325 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TBL3Q12788 808 aaKnown RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 TRIP10Q15642 601 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 MAP7D1Q3KQU3 841 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 POM121L1PQ3SYA9 428 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TMCO4Q5TGY1 634 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 NXNQ6DKJ4 435 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 FSTL4Q6MZW2 842 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 ARPINQ7Z6K5 226 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 PDSS2Q86YH6 399 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 LPCAT1Q8NF37 534 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 OR13C4Q8NGS5 318 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 IMP4Q96G21 291 aaKnown RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 POLR1EQ9GZS1 481 aaKnown RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 SLC25A51Q9H1U9 297 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TLK1Q9UKI8 766 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 WDR37Q9Y2I8 494 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 GREM1O60565 184 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 CLDN11O75508 207 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 ALDH1A2O94788 518 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 GRK2P25098 689 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 VIPR2P41587 438 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 IDH3AP50213 366 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 CCDC92Q53HC0 331 aaPredicted RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 GRTP1Q5TC63 336 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 STEAP4Q687X5 459 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 ZNF470Q6ECI4 717 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 KDELC1Q6UW63 502 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 CPNE1Q99829 537 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 IL22Q9GZX6 179 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 NKX2-4Q9H2Z4 354 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TASP1Q9H6P5 420 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 COMMD8Q9NX08 183 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TSR3Q9UJK0 312 aaKnown RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 LSM7Q9UK45 103 aaKnown RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 FAF1Q9UNN5 650 aaPredicted RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 ANTXRLA6NF34 631 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 STAMBPO95630 424 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 UQCRBP14927 111 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CEBPBP17676 345 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 MAPKAPK2P49137 400 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SERPINB8P50452 374 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CD300CQ08708 224 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 TBCCQ15814 346 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SPANXN3Q5MJ09 141 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 TCHHL1Q5QJ38 904 aaPredicted RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 C6orf183Q5T699 404 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 NET1Q7Z628 596 aaPredicted RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 DEFB107AQ8IZN7 70 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 PPHLN1Q8NEY8 458 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 OVCA2Q8WZ82 227 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 FEM1AQ9BSK4 669 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 PBX4Q9BYU1 374 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 MTG2Q9H4K7 406 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 VPS51Q9UID3 782 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 LZTS1Q9Y250 596 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 RBMX2Q9Y388 322 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 TYW5A2RUC4 315 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 PIGNO95427 931 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 GSRP00390 522 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 NELFEP18615 380 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 ADRA1AP35348 466 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SERPINB5P36952 375 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 HALP42357 657 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CD97P48960 835 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 RAP1GDS1P52306 607 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 RANBP10Q6VN20 620 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CPNE9Q8IYJ1 553 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 MRPL1Q9BYD6 325 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 PDFQ9HBH1 243 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 ANKRD12Q6UB98 2062 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SMIM31A0A1B0GVY4 71 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 AIM2O14862 343 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 MOSPD3O75425 235 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CD160O95971 181 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 C2P06681 752 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 ARNTP27540 789 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SERPINH1P50454 418 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 CHN2P52757 468 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 RHOAP61586 193 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 FOLH1Q04609 750 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 USP10Q14694 798 aaKnown RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 C16orf72Q14CZ0 275 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 TLR1Q15399 786 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CYTH1Q15438 398 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 FAM219BQ5XKK7 198 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 PKN3Q6P5Z2 889 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 TMEM135Q86UB9 458 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 CAMK1DQ8IU85 385 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 SLC41A1Q8IVJ1 513 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 PHTF2Q8N3S3 785 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 ZNF781Q8N8C0 355 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 C17orf50Q8WW18 174 aa10.64□□□□□ -0.71
TPM3-212ENST00000368533 USP13Q92995 863 aaPredicted RBP10.64□□□□□ -0.71
TPM3-212ENST00000368533 HDAC10Q969S8 669 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms