RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 SUFUQ9UMX1 484 aa23.8■■□□□ 1.4
PFDN2-201ENST00000368010 PLXNB3Q9ULL4 1909 aa23.8■■□□□ 1.4
PFDN2-201ENST00000368010 MAP1BP46821 2468 aaKnown RBP23.79■■□□□ 1.4
PFDN2-201ENST00000368010 LOC285095A0A1B0GVY8 99 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 INPP4BO15327 924 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 KCNN4O15554 427 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 POLD2P49005 469 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 TMC3Q7Z5M5 1100 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 TRIM74Q86UV6 250 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 LRRC8AQ8IWT6 810 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 FAM46DQ8NEK8 389 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 IPMKQ8NFU5 416 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 UBE2Q2Q8WVN8 375 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 EID2BQ96D98 161 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 MRGPRX2Q96LB1 330 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 GSDMCQ9BYG8 508 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 CDH19Q9H159 772 aa23.79■■□□□ 1.4
PFDN2-201ENST00000368010 GOLGA4Q13439 2230 aaKnown RBP23.78■■□□□ 1.4
PFDN2-201ENST00000368010 TRABD2BA6NFA1 517 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 NRDCO43847 1150 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 MT-CO3P00414 261 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 FUCA1P04066 466 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 CCDC175P0C221 793 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 ILF3Q12906 894 aaKnown RBP eCLIP23.78■■□□□ 1.4
PFDN2-201ENST00000368010 DCBLD1Q8N8Z6 715 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 CCL4L1Q8NHW4 92 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 PTCD2Q8WV60 388 aaKnown RBP23.78■■□□□ 1.4
PFDN2-201ENST00000368010 COX14Q96I36 57 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 FSD1LQ9BXM9 530 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 CCDC86Q9H6F5 360 aaKnown RBP23.78■■□□□ 1.4
PFDN2-201ENST00000368010 TMEM98Q9Y2Y6 226 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 SPO11Q9Y5K1 396 aa23.78■■□□□ 1.4
PFDN2-201ENST00000368010 FADS2P1A8MWK0 482 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ANXA9O76027 345 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ASMTLO95671 621 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 HLA-DPA1P20036 260 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 GEMP55040 296 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 DCDC1P59894 354 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 SIRPB2Q5JXA9 342 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ANKRD20A2Q5SQ80 823 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 PERM1Q5SV97 790 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ANKRD20A1Q5TYW2 823 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ANKRD20A3Q5VUR7 823 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ALS2CLQ60I27 953 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 SLC25A41Q8N5S1 370 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 GPBAR1Q8TDU6 330 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 SCARF2Q96GP6 870 aaPredicted RBP23.77■■□□□ 1.4
PFDN2-201ENST00000368010 OR2M4Q96R27 311 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 DPEP2Q9H4A9 486 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 TRABDQ9H4I3 376 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 NFKBIL1Q9UBC1 381 aaPredicted RBP23.77■■□□□ 1.4
PFDN2-201ENST00000368010 ZMIZ1Q9ULJ6 1067 aa23.77■■□□□ 1.4
PFDN2-201ENST00000368010 AKAP13Q12802 2813 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 EPG5Q9HCE0 2579 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 CHRNA4P43681 627 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 KLF1Q13351 362 aaPredicted RBP23.76■■□□□ 1.39
PFDN2-201ENST00000368010 PRPSAP1Q14558 356 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 SLC1A5Q15758 541 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 CDCP2Q5VXM1 449 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 MARK2Q7KZI7 788 aaKnown RBP23.76■■□□□ 1.39
PFDN2-201ENST00000368010 GPR26Q8NDV2 337 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 GPR156Q8NFN8 814 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 OR6C4Q8NGE1 309 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 NXPE2Q96DL1 559 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 SPATA13Q96N96 652 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 DEPDC7Q96QD5 511 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 SPATA16Q9BXB7 569 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 HACD3Q9P035 362 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 VPS18Q9P253 973 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 GPSM3Q9Y4H4 160 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 IGF2RP11717 2491 aa23.76■■□□□ 1.39
PFDN2-201ENST00000368010 B4DGG1 531 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 FGF1P05230 155 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 ADCY8P40145 1251 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 CCZ1BP86790 482 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 CCZ1P86791 482 aaPredicted RBP23.75■■□□□ 1.39
PFDN2-201ENST00000368010 ZNF569Q5MCW4 686 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 SEL1L2Q5TEA6 688 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 OGFOD3Q6PK18 319 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 ZNF662Q6ZS27 426 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 NRROSQ86YC3 692 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 GALNT13Q8IUC8 556 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 MDM1Q8TC05 714 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 ALS2CR12Q96Q35 445 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 CCDC3Q9BQI4 270 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 ZSCAN5AQ9BUG6 496 aa23.75■■□□□ 1.39
PFDN2-201ENST00000368010 CNOT6Q9ULM6 557 aaKnown RBP23.75■■□□□ 1.39
PFDN2-201ENST00000368010 AAR2Q9Y312 384 aaKnown RBP23.75■■□□□ 1.39
PFDN2-201ENST00000368010 AURKAO14965 403 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 NOBOXO60393 691 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 CAPNS1P04632 268 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 ATP1A1P05023 1023 aaKnown RBP23.74■■□□□ 1.39
PFDN2-201ENST00000368010 BPIP17213 487 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 PSMB4P28070 264 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 CTBSQ01459 385 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 PEX6Q13608 980 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 C14orf28Q4W4Y0 310 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 PDPK2PQ6A1A2 396 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 TRAM1L1Q8N609 369 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 WDR48Q8TAF3 677 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms