RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SNX19Q92543 992 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 PPP1R14BQ96C90 147 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 HBEGFQ99075 208 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 KCTD14Q9BQ13 255 aaPredicted RBP13.55□□□□□ -0.24
PRKN-205ENST00000366897 NEURL2Q9BR09 285 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 ABCD2Q9UBJ2 740 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 POLG2Q9UHN1 485 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 PTBP2Q9UKA9 531 aaKnown RBP13.55□□□□□ -0.24
PRKN-205ENST00000366897 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
PRKN-205ENST00000366897 ASPDHA6ND91 283 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 SYNCRIPO60506 623 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 NOL3O60936 208 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 TCF3P15923 654 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CCNA2P20248 432 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PRDX3P30048 256 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 ACADVLP49748 655 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 SREBF2Q12772 1141 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 TIGD2Q4W5G0 525 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PERM1Q5SV97 790 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 FAM117BQ6P1L5 589 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CLYBLQ8N0X4 340 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 OR13J1Q8NGT2 312 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PPTC7Q8NI37 304 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 ADAMTS16Q8TE57 1224 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 DQX1Q8TE96 717 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 TRIM15Q9C019 465 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 NT5MQ9NPB1 228 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PCDH12Q9NPG4 1184 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 EXD2Q9NVH0 621 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 WARS2Q9UGM6 360 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 AXIN1O15169 862 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 SLC25A27O95847 323 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 WARSP23381 471 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 AXLP30530 894 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CD86P42081 329 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PHEXP78562 749 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 ACAP2Q15057 778 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 SPRED1Q7Z699 444 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 HS3ST5Q8IZT8 346 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 TMEM125Q96AQ2 219 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CCDC126Q96EE4 140 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 FEM1CQ96JP0 617 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 LHPPQ9H008 270 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 ING2Q9H160 280 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 RGS18Q9NS28 235 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 LOC285556D6RIA3 1793 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 PTGESO14684 152 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 AZIN1O14977 448 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 XYLBO75191 536 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 HSD17B1P14061 328 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 HALP42357 657 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 GEMP55040 296 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 OR4D2P58180 307 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 UFM1P61960 85 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 ZNF354CQ86Y25 554 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CILP2Q8IUL8 1156 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 KIAA2013Q8IYS2 634 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 ACOX2Q99424 681 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 CHID1Q9BWS9 393 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 MAF1Q9H063 256 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 SAGE1Q9NXZ1 904 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 NEU3Q9UQ49 428 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 IPPQ9Y573 584 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 ST14Q9Y5Y6 855 aa13.54□□□□□ -0.24
PRKN-205ENST00000366897 OAS3Q9Y6K5 1087 aaKnown RBP13.54□□□□□ -0.24
PRKN-205ENST00000366897 TSC2P49815 1807 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 TRIM64A6NGJ6 449 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 MANSC4A6NHS7 340 aaPredicted RBP13.53□□□□□ -0.24
PRKN-205ENST00000366897 DYNC1LI2O43237 492 aaPredicted RBP13.53□□□□□ -0.24
PRKN-205ENST00000366897 CACNG3O60359 315 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 PAGE1O75459 146 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 BCL10O95999 233 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 LDLRP01130 860 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 ALBP02768 609 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
PRKN-205ENST00000366897 HERVK_113P63132 956 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 DSC2Q02487 901 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 GSTM4Q03013 218 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 PM20D1Q6GTS8 502 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 C14orf80Q86SX3 495 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 IGFN1Q86VF2 1251 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 PHYKPLQ8IUZ5 450 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 SLC22A9Q8IVM8 553 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
PRKN-205ENST00000366897 IL12RB2Q99665 862 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms